.getDefaultSandbox      .getDefaultSandbox
.getRequester           .getRequester
AddToGroup              Add to Group
RCy3                    RCy3: Functions to Access and Control Cytoscape
RemoveFromGroup         Remove from Group
addAnnotationText       Add Text Annotation
addCyEdges              Add CyEdges
addCyNodes              Add CyNodes
analyzeNetwork          Analyze Network
applyFilter             Apply Filter
bundleEdges             Bundle Edges
checkNotebookIsRunning
                        checkNotebookIsRunning
checkRunningRemote      checkRunningRemote
clearEdgeBends          Clear Edge Bends
clearEdgePropertyBypass
                        Clear Edge Property Bypass
clearNetworkCenterBypass
                        Clear Network Center Bypass
clearNetworkPropertyBypass
                        Clear Network Property Bypass
clearNetworkZoomBypass
                        Clear Network Zoom Bypass
clearNodeOpacityBypass
                        Clear Node Opacity Bypass
clearNodePropertyBypass
                        Clear Node Property Bypass
clearSelection          Clear Selection
cloneNetwork            Clone a Cytoscape Network
closeSession            Close Session
collapseGroup           Collapse Group
commandEcho             Command Echo
commandOpenDialog       Command Open Dialog
commandPause            Command Pause
commandQuit             Command Quit
commandRunFile          Command Run File
commandSleep            Command Sleep
commandsAPI             Open Swagger docs for CyREST Commands API
commandsGET             Commands GET
commandsHelp            Commands Help
commandsPOST            Commands POST
commandsRun             Run a Command
copyVisualStyle         Copy Visual Style
createColumnFilter      Create Column Filter
createCompositeFilter   Create Composite Filter
createDegreeFilter      Create Degree Filter
createGraphFromNetwork
                        createGraphFromNetwork
createGroup             Create Group
createGroupByColumn     Create Group by Column
createIgraphFromNetwork
                        Create an igraph network from a Cytoscape
                        network
createNetworkFromDataFrames
                        Create a network from data frames
createNetworkFromGraph
                        Create Network From Graph
createNetworkFromIgraph
                        Create a Cytoscape network from an igraph
                        network
createSubnetwork        Create subnetwork from existing network
createVisualStyle       Create a visual style from components
cybrowserClose          Cybrowser Close
cybrowserDialog         Cybrowser Dialog
cybrowserHide           Cybrowser Hide
cybrowserList           Cybrowser List
cybrowserSend           Cybrowser Send
cybrowserShow           Cybrowser Show
cybrowserVersion        Cybrowser Version
cyrestAPI               Open Swagger docs for CyREST API
cyrestDELETE            CyREST DELETE
cyrestGET               CyREST GET
cyrestPOST              CyREST POST
cyrestPUT               CyREST PUT
cytoscapeApiVersions    Available CyREST API Versions
cytoscapeFreeMemory     Free Up Unused Memory for Cytoscape
cytoscapeMemoryStatus   Memory Available to Cytoscape
cytoscapeNumberOfCores
                        Number of Processors Available to Cytoscape
cytoscapePing           Ping Cytoscape
cytoscapeVersionInfo    Cytoscape and CyREST API Versions
deleteAllNetworks       Delete All Networks
deleteAnnotation        Delete Annotation
deleteDuplicateEdges    Delete Duplicate Edges
deleteGroup             Delete (or Ungroup) a Group
deleteNetwork           Delete Network
deleteSelectedEdges     Delete Selected Edges
deleteSelectedNodes     Delete Selected Nodes
deleteSelfLoops         Delete Self Loops
deleteStyleMapping      Delete Style Mapping
deleteTableColumn       Delete a table column
deleteVisualStyle       Delete Visual Style
diffusionAdvanced       Diffusion Advanced
diffusionBasic          Diffusion Basic
disableApp              Disable App
doInitializeSandbox     doInitializeSandbox
doRequestRemote         doRequestRemote
doSetSandbox            doSetSandbox
dockPanel               Dock Panel
enableApp               Enable App
expandGroup             Expand Group
exportFilters           Export Filters
exportImage             Export Image
exportNetwork           Export Network
exportNetworkToNDEx     Export Network To NDEx
exportVisualStyles      Export Visual Styles
findRemoteCytoscape     findRemoteCytoscape
fitContent              Fit Content
floatPanel              Float Panel
getAbsSandboxPath       getAbsSandboxPath
getAllEdges             Get All Edges
getAllNodes             Get All Nodes
getAllStyleMappings     Get All Style Mappings
getAnnotationList       Get Annotation List
getAppInformation       Get App Information
getAppStatus            App Status
getAppUpdates           List Apps With Updates
getArrowShapes          Get Arrow Shapes
getAvailableApps        List Available Apps
getBackgroundColorDefault
                        Get Background Color Default
getBrowserClientChannel
                        getBrowserClientChannel
getBrowserClientJs      getBrowserClientJs
getCollectionList       Get Collection List
getCollectionName       Get Collection Name
getCollectionNetworks   Get Collection Networks
getCollectionSuid       Get Collection Suid
getCurrentSandbox       getCurrentSandbox
getCurrentSandboxName   getCurrentSandboxName
getCurrentSandboxPath   getCurrentSandboxPath
getCurrentStyle         Get Current Style
getDefaultSandbox       getDefaultSandbox
getDefaultSandboxPath   getDefaultSandboxPath
getDisabledApps         List Disabled Apps
getEdgeColor            Get Edge Color
getEdgeCount            Get Edge Count
getEdgeInfo             Get Edge Information
getEdgeLineStyle        Get Edge Line Style
getEdgeLineWidth        Get Edge Line Width
getEdgeProperty         Get Edge Property Values
getEdgeSelectionColorDefault
                        Get Edge Selection Color Default
getEdgeTargetArrowShape
                        Get Edge Target Arrow Shape
getFilterList           Get Filter List
getFirstNeighbors       Get list of nodes neighboring provided list
getGroupInfo            Get Group Information
getInstalledApps        List Installed Apps
getJupyterBridgeURL     getJupyterBridgeURL
getLayoutNameMapping    Get Layout Name Mapping
getLayoutNames          Get Layout Names
getLayoutPropertyNames
                        Get Layout Property Names
getLayoutPropertyType   Get Layout Property Type
getLayoutPropertyValue
                        Get Layout Property Value
getLineStyles           Get Line Styles
getNetworkCenter        Get Network Center
getNetworkCount         Get the number of Cytoscape networks
getNetworkList          Get the list of Cytoscape networks
getNetworkNDExId        Get Network NDEx Id
getNetworkName          Get the name of a network
getNetworkProperty      Get Network Property Values
getNetworkSuid          Get the SUID of a network
getNetworkViewSuid      Get the SUID of a network view
getNetworkViews         Get Network Views
getNetworkZoom          Get Network Zoom
getNodeColor            Get Node Color
getNodeCount            Get Node Count
getNodeHeight           Get Node Height
getNodePosition         Get Node Position
getNodeProperty         Get Node Property Values
getNodeSelectionColorDefault
                        Get Node Selection Color Default
getNodeShapes           Get Node Shapes
getNodeSize             Get Node Size
getNodeWidth            Get Node Width
getNotebookIsRunning    getNotebookIsRunning
getSandboxReinitialize
                        getSandboxReinitialize
getSelectedEdgeCount    Get Selected Edge Count
getSelectedEdges        Get Selected Edges
getSelectedNodeCount    Get Selected Node Count
getSelectedNodes        Get Selected Nodes
getStyleDependencies    Get the values of dependencies in a style
getStyleMapping         Get Style Mapping
getTableColumnNames     Get Table Column Names
getTableColumnTypes     Get Table Column Types
getTableColumns         Get table column values
getTableValue           Get table cell value
getUninstalledApps      List Uninstalled Apps
getVisualPropertyDefault
                        Get Visual Property Default
getVisualPropertyNames
                        Get Visual Property Names
getVisualStyleNames     Get Visual Style Names
hideAllPanels           Hide All Panels
hideEdges               Hide Edges
hideNodes               Hide Nodes
hidePanel               Hide Panel
hideSelectedEdges       Hide Selected Edges
hideSelectedNodes       Hide Selected Nodes
importFilters           Import Filters
importNetworkFromFile   Import Network From File
importNetworkFromNDEx   Import Network From NDEx
importVisualStyles      Import Visual Styles
installApp              Install App
invertEdgeSelection     Invert Edge Selection
invertNodeSelection     Invert Node Selection
layoutCopycat           Copy a layout from one network to another
layoutNetwork           Apply a layout to a network
listGroups              List Groups
loadTableData           Loads data into Cytoscape tables keyed by row
lockNodeDimensions      Lock Node Dimensions
makeSimpleGraph         Make Simple Graph
makeSimpleIgraph        Make Simple Igraph
mapTableColumn          Map Table Column
mapVisualProperty       Creates a mapping between an attribute and a
                        visual property
matchArrowColorToEdge   Match Arrow Color To Edge
mergeNetworks           Merge Networks
openAppStore            Open App Store Page
openSession             Open Session File or URL
paletteColorBrewerAccent
                        paletteColorBrewerAccent Qualitative
paletteColorBrewerBlues
                        paletteColorBrewerBlues Sequential
paletteColorBrewerBrBG
                        paletteColorBrewerBrBG Divergent
paletteColorBrewerBuGn
                        paletteColorBrewerBuGn Sequential
paletteColorBrewerBuPu
                        paletteColorBrewerBuPu Sequential
paletteColorBrewerDark2
                        paletteColorBrewerDark2 Qualitative
paletteColorBrewerGnBu
                        paletteColorBrewerGnBu Sequential
paletteColorBrewerGreens
                        paletteColorBrewerGreens Sequential
paletteColorBrewerGreys
                        paletteColorBrewerGreys Sequential
paletteColorBrewerOrRd
                        paletteColorBrewerOrRd Sequential
paletteColorBrewerOranges
                        paletteColorBrewerOranges Sequential
paletteColorBrewerPRGn
                        paletteColorBrewerPRGn Divergent
paletteColorBrewerPaired
                        paletteColorBrewerPaired Qualitative
paletteColorBrewerPastel1
                        paletteColorBrewerPastel1 Qualitative
paletteColorBrewerPastel2
                        paletteColorBrewerPastel2 Qualitative
paletteColorBrewerPiYG
                        paletteColorBrewerPiYG Divergent
paletteColorBrewerPuBu
                        paletteColorBrewerPuBu Sequential
paletteColorBrewerPuBuGn
                        paletteColorBrewerPuBuGn Sequential
paletteColorBrewerPuOr
                        paletteColorBrewerPuOr Divergent
paletteColorBrewerPuRd
                        paletteColorBrewerPuRd Sequential
paletteColorBrewerPurples
                        paletteColorBrewerPurples Sequential
paletteColorBrewerRdBu
                        paletteColorBrewerRdBu Divergent
paletteColorBrewerRdPu
                        paletteColorBrewerRdPu Sequential
paletteColorBrewerRdYlBu
                        paletteColorBrewerRdYlBu Divergent
paletteColorBrewerReds
                        paletteColorBrewerReds Sequential
paletteColorBrewerSet1
                        paletteColorBrewerSet1 Qualitative
paletteColorBrewerSet2
                        paletteColorBrewerSet2 Qualitative
paletteColorBrewerSet3
                        paletteColorBrewerSet3 Qualitative
paletteColorBrewerYlGn
                        paletteColorBrewerYlGn Sequential
paletteColorBrewerYlGnBu
                        paletteColorBrewerYlGnBu Sequential
paletteColorBrewerYlOrBr
                        paletteColorBrewerYlOrBr Sequential
paletteColorBrewerYlOrRd
                        paletteColorBrewerYlOrRd Sequential
paletteColorRandom      paletteColorRandom Qualitative
removeNodeCustomGraphics
                        Remove Node Custom Graphics
renameNetwork           Rename a network
renameTableColumn       Rename Table Column
resetDefaultSandbox     resetDefaultSandbox
runningRemoteCheck      runningRmoteCheck
sandboxGetFileInfo      sandboxGetFileInfo
sandboxGetFrom          sandboxGetFrom
sandboxInitializer      sandboxInitializer
sandboxRemove           sandboxRemove
sandboxRemoveFile       sandboxRemoveFile
sandboxSendTo           sandboxSendTo
sandboxSet              sandboxSet
sandboxUrlTo            sandboxUrlTo
saveSession             Save Session to File
selectAllEdges          Select all edges
selectAllNodes          Select all nodes
selectEdges             Select Edges
selectEdgesAdjacentToSelectedNodes
                        Select Edges Adjacent To Selected Nodes
selectEdgesConnectingSelectedNodes
                        Select the edges connecting selected nodes in
                        Cytoscape Network
selectFirstNeighbors    Select first neighbor nodes
selectNodes             Select Nodes
selectNodesConnectedBySelectedEdges
                        Select Nodes Connected By Selected Edges
setBackgroundColorDefault
                        Set Background Color Default
setCatchupFilterSecs    Set Catchup Filter Delay
setCatchupNetworkSecs   Set Catchup Network Delay
setCurrentNetwork       Set current network
setCurrentSandbox       setCurrentSandbox
setCurrentView          Set Current View
setDefaultSandbox       setDefaultSandbox
setDefaultSandboxPath   setDefaultSandboxPath
setEdgeColorBypass      Set Edge Color Bypass
setEdgeColorDefault     Set Edge Color Default
setEdgeColorMapping     Set Edge Color Mapping
setEdgeFontFaceBypass   Set Edge Font Face Bypass
setEdgeFontFaceDefault
                        Set Edge Font Face Default
setEdgeFontFaceMapping
                        Set Edge Font Face Mapping
setEdgeFontSizeBypass   Set Edge Font Size Bypass
setEdgeFontSizeDefault
                        Set Edge Font Size Default
setEdgeFontSizeMapping
                        Set Edge Font Size Mapping
setEdgeLabelBypass      Set Edge Label Bypass
setEdgeLabelColorBypass
                        Set Edge Label Color Bypass
setEdgeLabelColorDefault
                        Set Edge Label Color Default
setEdgeLabelColorMapping
                        Set Edge Label Color Mapping
setEdgeLabelDefault     Set Edge Label Default
setEdgeLabelMapping     Set Edge Label Mapping
setEdgeLabelOpacityBypass
                        Set Edge Label Opacity Bypass
setEdgeLabelOpacityDefault
                        Set Edge Label Opacity Default
setEdgeLabelOpacityMapping
                        Set Edge Label Opacity Mapping
setEdgeLineStyleBypass
                        Set Edge Line Style Bypass
setEdgeLineStyleDefault
                        Set Edge Line Style Default
setEdgeLineStyleMapping
                        Set Edge Line Style Mapping
setEdgeLineWidthBypass
                        Set Edge Line Width Bypass
setEdgeLineWidthDefault
                        Set Edge Line Width Default
setEdgeLineWidthMapping
                        Set Edge Line Width Mapping
setEdgeOpacityBypass    Set Edge Opacity Bypass
setEdgeOpacityDefault   Set Edge Opacity Default
setEdgeOpacityMapping   Set Edge Opacity Mapping
setEdgePropertyBypass   Set Edge Property Bypass
setEdgeSelectionColorDefault
                        Set Edge Selection Color Default
setEdgeSourceArrowColorBypass
                        Set Edge Source Arrow Color Bypass
setEdgeSourceArrowColorDefault
                        Set Edge Source Arrow Color Default
setEdgeSourceArrowColorMapping
                        Set Edge Source Arrow Color Mapping
setEdgeSourceArrowMapping
                        Set Edge Source Arrow Mapping
setEdgeSourceArrowShapeBypass
                        Set Edge Source Arrow Shape Bypass
setEdgeSourceArrowShapeDefault
                        Set Edge Source Arrow Shape Default
setEdgeSourceArrowShapeMapping
                        Set Edge Source Arrow Shape Mapping
setEdgeTargetArrowColorBypass
                        Set Edge Target Arrow Color Bypass
setEdgeTargetArrowColorDefault
                        Set Edge Target Arrow Color Default
setEdgeTargetArrowColorMapping
                        Set Edge Target Arrow Color Mapping
setEdgeTargetArrowMapping
                        Set Edge Target Arrow Mapping
setEdgeTargetArrowShapeBypass
                        Set Edge Target Arrow Shape Bypass
setEdgeTargetArrowShapeDefault
                        Set Edge Target Arrow Shape Default
setEdgeTargetArrowShapeMapping
                        Set Edge Target Arrow Shape Mapping
setEdgeTooltipBypass    Set Edge Tooltip Bypass
setEdgeTooltipDefault   Set Edge Tooltip Default
setEdgeTooltipMapping   Set Edge Tooltip Mapping
setLayoutProperties     Set Layout Properties
setModelPropagationSecs
                        Set Model Propagation Delay
setNetworkCenterBypass
                        Set Network Center Bypass
setNetworkPropertyBypass
                        Set Network Property Bypass
setNetworkZoomBypass    Set Network Zoom Bypass
setNodeBorderColorBypass
                        Set Node Border Color Bypass
setNodeBorderColorDefault
                        Set Node Border Color Default
setNodeBorderColorMapping
                        Set Node Border Color Mapping
setNodeBorderOpacityBypass
                        Set Node Border Opacity Bypass
setNodeBorderOpacityDefault
                        Set Node Border Opacity Default
setNodeBorderOpacityMapping
                        Set Node Border Opacity Mapping
setNodeBorderWidthBypass
                        Set Node Border Width Bypass
setNodeBorderWidthDefault
                        Set Node Border Width Default
setNodeBorderWidthMapping
                        Set Node Border Width Mapping
setNodeColorBypass      Set Node Color Bypass
setNodeColorDefault     Set Node Color Default
setNodeColorMapping     Set Node Color Mapping
setNodeComboOpacityMapping
                        Set Node Combo Opacity Mapping
setNodeCustomBarChart   Set Node Custom Bar Chart
setNodeCustomBoxChart   Set Node Custom Box Chart
setNodeCustomHeatMapChart
                        Set Node Custom HeatMap Chart
setNodeCustomLineChart
                        Set Node Custom Line Chart
setNodeCustomLinearGradient
                        Set Node Custom Linear Gradient
setNodeCustomPieChart   Set Node Custom Pie Chart
setNodeCustomPosition   Set Node Custom Position
setNodeCustomRadialGradient
                        Set Node Custom Radial Gradient
setNodeCustomRingChart
                        Set Node Custom Ring Chart
setNodeFillOpacityBypass
                        Set Node Fill Opacity Bypass
setNodeFillOpacityDefault
                        Set Node Fill Opacity Default
setNodeFillOpacityMapping
                        Set Node Fill Opacity Mapping
setNodeFontFaceBypass   Set Node Font Face Bypass
setNodeFontFaceDefault
                        Set Node Font Face Default
setNodeFontFaceMapping
                        Set Node Font Face Mapping
setNodeFontSizeBypass   Set Node Font Size Bypass
setNodeFontSizeDefault
                        Set Node Font Size Default
setNodeFontSizeMapping
                        Set Node Font Size Mapping
setNodeHeightBypass     Set Node Height Bypass
setNodeHeightDefault    Set Node Height Default
setNodeHeightMapping    Set Node Height Mapping
setNodeLabelBypass      Set Node Label Bypass
setNodeLabelColorBypass
                        Set Node Label Color Bypass
setNodeLabelColorDefault
                        Set Node Label Color Default
setNodeLabelColorMapping
                        Set Node Label Color Mapping
setNodeLabelDefault     Set Node Label Default
setNodeLabelMapping     Set Node Label Mapping
setNodeLabelOpacityBypass
                        Set Node Label Opacity Bypass
setNodeLabelOpacityDefault
                        Set Node Label Opacity Default
setNodeLabelOpacityMapping
                        Set Node Label Opacity Mapping
setNodeOpacityBypass    Set Node Opacity Bypass
setNodePropertyBypass   Set Node Property Bypass
setNodeSelectionColorDefault
                        Set Node Selection Color Default
setNodeShapeBypass      Set Node Shape Bypass
setNodeShapeDefault     Set Node Shape Default
setNodeShapeMapping     Set Node Shape Mapping
setNodeSizeBypass       Set Node Size Bypass
setNodeSizeDefault      Set Node Size Default
setNodeSizeMapping      Set Node Size Mapping
setNodeTooltipBypass    Set Node Tooltip Bypass
setNodeTooltipDefault   Set Node Tooltip Default
setNodeTooltipMapping   Set Node Tooltip Mapping
setNodeWidthBypass      Set Node Width Bypass
setNodeWidthDefault     Set Node Width Default
setNodeWidthMapping     Set Node Width Mapping
setNotebookIsRunning    setNotebookIsRunning
setSandboxReinitialize
                        setSandboxReinitialize
setStyleDependencies    Set Style Dependencies
setVisualPropertyDefault
                        Set Visual Property Default
setVisualStyle          Set Visual Style
spoofResponse-class     spoofResponse
syncNodeCustomGraphicsSize
                        Sync Node Custom Graphics Size
toggleGraphicsDetails   Toggle Graphics Details
unhideAll               Unhide All
unhideEdges             Unhide Edges
unhideNodes             Unhide Nodes
uninstallApp            Uninstall App
updateApp               Update App
updateNetworkInNDEx     Update Network In NDEx
updateStyleDefaults     Updates the default values of visual properties
                        in a style
updateStyleMapping      Updates a visual property mapping in a style
