c318f544d60c1305d0e014a2300fe87a *CITATION
0bb97f4b824e31839da002cde14e5e8d *DESCRIPTION
1bd1600ca002ee05c448ad21361334a1 *INDEX
518c24853bab395243ac98ce6ed96a02 *Meta/Rd.rds
7b28f8fa1fc5931ce0fd5ea8c8bfb808 *Meta/data.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
6dc0f89f6c29d0646e7610c8d621af5f *Meta/hsearch.rds
227afc624c1f44d37358f482fa60d170 *Meta/links.rds
848a4fffb13f8d7ff19929ef766eaa4d *Meta/nsInfo.rds
d0110fd7c46e6a803f0a6c8bc31509c0 *Meta/package.rds
6436767cb302c67d3913d58359f454e2 *Meta/vignette.rds
2c4e54c2f844b66a4864c745a95ee0cf *NAMESPACE
854ccb01a1ffe6b9c187ba9005257420 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/QDNAseq
833527ffc6a8fea32642585096bb3a84 *R/QDNAseq.rdb
ebc6628b2d770f2e192a8ea7b7473e08 *R/QDNAseq.rdx
d13f6a69b04fd1bf7ab9521c86f52b22 *WORDLIST
f8f9f3407a9cc97abbe6a1b1939fa711 *data/LGG150.rda
60acdc1abd0432dff1982e462f9df13b *doc/QDNAseq.R
8c808d71f55dd95236947849a179fc1e *doc/QDNAseq.Rnw
0d56be638cf2364a3f114a1756478665 *doc/QDNAseq.pdf
619e4c5f91859b2b4d9da2a905706e65 *doc/index.html
2b71c966dc9c1ab458f254e76cf57b02 *help/AnIndex
cbc782e80011b53be0eb0949ae75715a *help/LGG150.html
6fd6ad917d972926d033a1d29e4dabc9 *help/QDNAseq-defunct.html
a4f77117d4ff72e74bed636f255aaeee *help/QDNAseq-package.html
a4f77117d4ff72e74bed636f255aaeee *help/QDNAseq.html
c9308861ba85a2e8db95134a127ebdd0 *help/QDNAseq.rdb
c3f0807200ae8c8eeaecaf2bcaa8dde8 *help/QDNAseq.rdx
da8164b2dc4f67440eaa0f7bad55f07f *help/QDNAseqCopyNumbers-class.html
da8164b2dc4f67440eaa0f7bad55f07f *help/QDNAseqCopyNumbers.html
bbd02f53942cb2cb25ee8ad77886579a *help/QDNAseqReadCounts-class.html
bbd02f53942cb2cb25ee8ad77886579a *help/QDNAseqReadCounts.html
ca5b039f347979e26fc781f711fb790e *help/QDNAseqSignals-class.html
ca5b039f347979e26fc781f711fb790e *help/QDNAseqSignals.html
a9030a684e6097b29d0138d0b25428d0 *help/addPhenodata.html
85aa0fd21a36d3937f998c5369475f63 *help/aliases.rds
b0f6f0c6bc5826fdc715c0d79774ac62 *help/applyFilters,QDNAseqReadCounts-method.html
b0f6f0c6bc5826fdc715c0d79774ac62 *help/applyFilters.html
17c943603d1e20c08bb186e7a8a0950e *help/binReadCounts.html
ca5b039f347979e26fc781f711fb790e *help/bpend,QDNAseqSignals-method.html
ca5b039f347979e26fc781f711fb790e *help/bpstart,QDNAseqSignals-method.html
62e497dfbce44093bf7a6f8252c122a8 *help/calculateBlacklist.html
62e497dfbce44093bf7a6f8252c122a8 *help/calculateBlacklistByRegions.html
62e497dfbce44093bf7a6f8252c122a8 *help/calculateMappability.html
5ba06dcdddd2d44b424de1d081c9c60c *help/callBins,QDNAseqCopyNumbers-method.html
5ba06dcdddd2d44b424de1d081c9c60c *help/callBins.html
ca5b039f347979e26fc781f711fb790e *help/chromosomes,QDNAseqSignals-method.html
00c1cd345e43f9650fe3ea6a17f2f73f *help/compareToReference,QDNAseqCopyNumbers,numeric-method.html
00c1cd345e43f9650fe3ea6a17f2f73f *help/compareToReference.html
7cec51f23ac7af5fa303dd5145123713 *help/correctBins,QDNAseqReadCounts-method.html
7cec51f23ac7af5fa303dd5145123713 *help/correctBins.html
62e497dfbce44093bf7a6f8252c122a8 *help/createBins.html
6fd6ad917d972926d033a1d29e4dabc9 *help/downloadBinAnnotations.html
6fff76dad7e69bf72239bb3434747b80 *help/estimateCorrection,QDNAseqReadCounts-method.html
6fff76dad7e69bf72239bb3434747b80 *help/estimateCorrection.html
22fe4f52aea255dd67e6545ec5cc794a *help/exportBins,QDNAseqSignals-method.html
22fe4f52aea255dd67e6545ec5cc794a *help/exportBins.html
d95eb01086bafeef9080ea7d3c53578c *help/frequencyPlot,QDNAseqCopyNumbers,missing-method.html
d95eb01086bafeef9080ea7d3c53578c *help/frequencyPlot.html
e2cec18ac0a783439c4e3fbe19a545df *help/getBinAnnotations.html
067fb21dc3c5f56df25f041aa5fb7aa1 *help/highlightFilters,QDNAseqSignals-method.html
067fb21dc3c5f56df25f041aa5fb7aa1 *help/highlightFilters.html
e24c7a74acfe4ffbe1eee7a78c5b886a *help/isobarPlot,QDNAseqReadCounts,missing-method.html
e24c7a74acfe4ffbe1eee7a78c5b886a *help/isobarPlot.html
62e497dfbce44093bf7a6f8252c122a8 *help/iterateResiduals.html
a4771203085feb918e48d21d31c954bd *help/makeCgh,QDNAseqCopyNumbers-method.html
a4771203085feb918e48d21d31c954bd *help/makeCgh.html
f54e08dcc12faaaa17a7839b028ea622 *help/noisePlot,QDNAseqReadCounts,missing-method.html
f54e08dcc12faaaa17a7839b028ea622 *help/noisePlot.html
82734e553dc2ad9441612287b73dccf3 *help/normalizeBins,QDNAseqCopyNumbers-method.html
82734e553dc2ad9441612287b73dccf3 *help/normalizeBins.html
ed9d222118ced9234ab6302a6c387fde *help/normalizeSegmentedBins,QDNAseqCopyNumbers-method.html
ed9d222118ced9234ab6302a6c387fde *help/normalizeSegmentedBins.html
ac95437dc3aab324c1805a0c222b42e6 *help/paths.rds
b5436f87344e02650d0245d4d7de4a37 *help/plot,QDNAseqSignals,missing-method.html
b5436f87344e02650d0245d4d7de4a37 *help/plot.html
21d7fb4d882aed5c5eec09577c0d4aa8 *help/poolRuns,QDNAseqSignals,character-method.html
21d7fb4d882aed5c5eec09577c0d4aa8 *help/poolRuns.html
465d6b3e1f1134d8d8e7134a55be3b84 *help/segmentBins,QDNAseqCopyNumbers-method.html
465d6b3e1f1134d8d8e7134a55be3b84 *help/segmentBins.html
142853454549d58d56b52fef8e98fdbd *help/smoothOutlierBins,QDNAseqCopyNumbers-method.html
142853454549d58d56b52fef8e98fdbd *help/smoothOutlierBins.html
91d6045a33318042195cd21fbc7f49e7 *html/00Index.html
1280bbf84fb1f45be0126e82ce1b6355 *html/LGG150.html
2754b309bf6c32ed86a6735071b4369c *html/QDNAseq-defunct.html
fce341f39925fd9c2b7dee344f04636d *html/QDNAseq-package.html
39102f52fdfd37f807be017a82b7a591 *html/QDNAseqCopyNumbers.html
4d28383f571a48c22d473438a05835f9 *html/QDNAseqReadCounts.html
6ae4c00d29df226c34b8e0ab4dddfe48 *html/QDNAseqSignals.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
5d604577a68cdccc9c990dc2e3418b68 *html/addPhenodata.html
64e9d6a99aa1c4e1d0e1926d00ee2afb *html/applyFilters.html
972026fb1ffbb909f476fbf976cb5bc3 *html/binReadCounts.html
f464ff973cb55604e50c73bff3f37627 *html/callBins.html
a87e661a6c68ac116955624d380140be *html/compareToReference.html
da702709bf44b159a02a067982cd2a34 *html/correctBins.html
0c49114d75e98ae7233867259fe86c0c *html/createBins.html
3802699849d890d244640e6ade36fa8a *html/estimateCorrection.html
b49c79e3dc7914727e031d57ae7b4fb9 *html/exportBins.html
61b1522e464f2da18115766b361575c6 *html/frequencyPlot.html
9287764d3af2100298d71c5606dce910 *html/getBinAnnotations.html
359664d2c9e7a9b7eaacd11de77e8edf *html/highlightFilters.html
a16822ca0614f80b35832748f8fe7baa *html/isobarPlot.html
616fbedd3ce68f520dc7d25701ac2b35 *html/makeCgh.html
f8a56786047a8424de3cf21932396e70 *html/noisePlot.html
33be0eebd2f019192dc73a4d37055d82 *html/normalizeBins.html
871a957dde71237a2a11c4124db049bb *html/normalizeSegmentedBins.html
8e855448feeb87ab4560141a7586f8eb *html/plot.html
b0188b28d77740647eb1b7d80ea7076b *html/poolRuns.html
a2f3e430742fae658d692f4c9d7fc95b *html/segmentBins.html
8d06b201c53ba342c61247683ea00748 *html/smoothOutlierBins.html
