d0afa5d81e5fb2f6bbfd9d32d6cd5b80 *DESCRIPTION
3d7eb78ee3cbc9441596a79aaef65f78 *INDEX
5145875c206f680e13755e31968d409d *Meta/Rd.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
ea664cf104f63bb1eaf09fe95945ae31 *Meta/hsearch.rds
2c7e166768194324412f5aab55f393ab *Meta/links.rds
42463ff50b6de162c0c52066453de41f *Meta/nsInfo.rds
161918358adaf401dc332035f8aeea4f *Meta/package.rds
36529b6dba2b4d18a8b8396630ef37a0 *Meta/vignette.rds
53e5170be6c028be3fd39e9a433936fc *NAMESPACE
d6c68f1fe41ced6e98a766a3757313da *R/PREDA
69bf8f1efdf9d7936c5e56fd92fe0217 *R/PREDA.rdb
0511634089c7ea63a1971785447a5937 *R/PREDA.rdx
422bc44b297661568dcf2d5c16c3ae5a *doc/PREDAclasses.Rnw
37102d171130a4eb93d5627dacc64a5d *doc/PREDAclasses.pdf
0020a4a7c88c40bc439a5e5cd3573ce1 *doc/PREDAtutorial.R
1299efb9ebcb410544f6aa172f3512da *doc/PREDAtutorial.Rnw
8022d1be172e1b9af560c26e4fad92d6 *doc/PREDAtutorial.pdf
601d7edfd365bbc1818d2f0ddeeb5924 *doc/index.html
eadeec9b3f55880e04936c5905d24465 *help/AnIndex
087439a46ab6e87414560cfec3e9ef5e *help/DataForPREDA-class.html
3718eb6de469b951168e9a7c8652eea9 *help/DataForPREDA2GenomicAnnotationsForPREDA,DataForPREDA-method.html
3718eb6de469b951168e9a7c8652eea9 *help/DataForPREDA2GenomicAnnotationsForPREDA.html
220144c2442e6a7ee4dc30ce6489c28e *help/DataForPREDA2StatisticsForPREDA,DataForPREDA-method.html
220144c2442e6a7ee4dc30ce6489c28e *help/DataForPREDA2StatisticsForPREDA.html
a201bb117c5965e7f1de65b08c16e215 *help/DataForPREDA2dataframe,DataForPREDA-method.html
a201bb117c5965e7f1de65b08c16e215 *help/DataForPREDA2dataframe.html
c757badae7d36e7a42b2cac21fdf3cd3 *help/DataForPREDAMedianCenter,DataForPREDA-method.html
c757badae7d36e7a42b2cac21fdf3cd3 *help/DataForPREDAMedianCenter.html
2d096084d07b370387ebd2dfa186bb0f *help/GenomicAnnotations-class.html
2cbcb321e35e8d4368c11b3ca9261c92 *help/GenomicAnnotations2GenomicAnnotationsForPREDA,GenomicAnnotations-method.html
2cbcb321e35e8d4368c11b3ca9261c92 *help/GenomicAnnotations2GenomicAnnotationsForPREDA.html
c4e24940dd5c35ce8ab89125b40d56ed *help/GenomicAnnotations2dataframe,GenomicAnnotations-method.html
c4e24940dd5c35ce8ab89125b40d56ed *help/GenomicAnnotations2dataframe,GenomicAnnotationsForPREDA-method.html
c4e24940dd5c35ce8ab89125b40d56ed *help/GenomicAnnotations2dataframe.html
e692a44439655604f324f2d70b10ce69 *help/GenomicAnnotations2reference_positions,GenomicAnnotations-method.html
e692a44439655604f324f2d70b10ce69 *help/GenomicAnnotations2reference_positions.html
c5d455b91b71a34171fa925fe7e24b0d *help/GenomicAnnotationsExtract,GenomicAnnotations-method.html
c5d455b91b71a34171fa925fe7e24b0d *help/GenomicAnnotationsExtract.html
9776b273111470d7594e7f6d368fad46 *help/GenomicAnnotationsFilter_neg,DataForPREDA-method.html
9776b273111470d7594e7f6d368fad46 *help/GenomicAnnotationsFilter_neg,GenomicAnnotations-method.html
9776b273111470d7594e7f6d368fad46 *help/GenomicAnnotationsFilter_neg,GenomicAnnotationsForPREDA-method.html
9776b273111470d7594e7f6d368fad46 *help/GenomicAnnotationsFilter_neg.html
585e2cc3eac44e086594e6e7a649030a *help/GenomicAnnotationsFilter_pos,DataForPREDA-method.html
585e2cc3eac44e086594e6e7a649030a *help/GenomicAnnotationsFilter_pos,GenomicAnnotations-method.html
585e2cc3eac44e086594e6e7a649030a *help/GenomicAnnotationsFilter_pos,GenomicAnnotationsForPREDA-method.html
585e2cc3eac44e086594e6e7a649030a *help/GenomicAnnotationsFilter_pos.html
6978441d4ea728f3d6b5e47427a62d84 *help/GenomicAnnotationsForPREDA-class.html
08ccb84fb44e1da71a9172bd27288c47 *help/GenomicAnnotationsForPREDA2GenomicAnnotations,GenomicAnnotationsForPREDA-method.html
08ccb84fb44e1da71a9172bd27288c47 *help/GenomicAnnotationsForPREDA2GenomicAnnotations.html
3d7bb03f8ce811e81af7c4e68a03785f *help/GenomicAnnotationsForPREDA2PREDAResults,GenomicAnnotationsForPREDA-method.html
3d7bb03f8ce811e81af7c4e68a03785f *help/GenomicAnnotationsForPREDA2PREDAResults.html
d6fb7f62fca80506de77d1ee525a815e *help/GenomicAnnotationsForPREDA2dataframe,GenomicAnnotationsForPREDA-method.html
d6fb7f62fca80506de77d1ee525a815e *help/GenomicAnnotationsForPREDA2dataframe.html
0e57a2141648cf4b34568defd1052db2 *help/GenomicAnnotationsForPREDAFromfile.html
444f17de024ce0aafe75343b672655b7 *help/GenomicAnnotationsFromLibrary.html
e62ae2ee00895d561b83511c091540eb *help/GenomicAnnotationsFromdataframe.html
2cece9a4c13cbe807098f7445a102e55 *help/GenomicAnnotationsFromfile.html
fd016fae927deb1cc0b721032307f18e *help/GenomicAnnotationsSortAndCleanNA,DataForPREDA-method.html
fd016fae927deb1cc0b721032307f18e *help/GenomicAnnotationsSortAndCleanNA,GenomicAnnotations-method.html
fd016fae927deb1cc0b721032307f18e *help/GenomicAnnotationsSortAndCleanNA,GenomicAnnotationsForPREDA-method.html
fd016fae927deb1cc0b721032307f18e *help/GenomicAnnotationsSortAndCleanNA,PREDADataAndResults-method.html
fd016fae927deb1cc0b721032307f18e *help/GenomicAnnotationsSortAndCleanNA,PREDAResults-method.html
fd016fae927deb1cc0b721032307f18e *help/GenomicAnnotationsSortAndCleanNA.html
2a70c1071557cfd7eedc72cf4f5abeb3 *help/GenomicRegions-class.html
a240bc9d8079c1c958217d17503ec162 *help/GenomicRegions2dataframe.html
0e0f88c5d3dac3dd5ac233c175106d4b *help/GenomicRegionsAnnotate,GenomicRegions,GenomicAnnotations-method.html
0e0f88c5d3dac3dd5ac233c175106d4b *help/GenomicRegionsAnnotate.html
547069376c4a9a3e668c0358648c72de *help/GenomicRegionsChrNumber,GenomicRegions-method.html
547069376c4a9a3e668c0358648c72de *help/GenomicRegionsChrNumber.html
ae23e760c1750c8f0804292b67efa21e *help/GenomicRegionsComparison,GenomicRegions,GenomicRegions-method.html
ae23e760c1750c8f0804292b67efa21e *help/GenomicRegionsComparison.html
1b1dd1ac64d1c53f913261270db8e7b0 *help/GenomicRegionsCreateRegionsIds,GenomicRegions-method.html
1b1dd1ac64d1c53f913261270db8e7b0 *help/GenomicRegionsCreateRegionsIds.html
198a2b8bfa20961a15a7c41e6af76bce *help/GenomicRegionsFilter_neg,GenomicRegions-method.html
198a2b8bfa20961a15a7c41e6af76bce *help/GenomicRegionsFilter_neg.html
75f0b92057df9f7459541f1eaef8ac76 *help/GenomicRegionsFilter_pos,GenomicRegions-method.html
75f0b92057df9f7459541f1eaef8ac76 *help/GenomicRegionsFilter_pos.html
eb658773e0303bae3d2eaaea81fdd568 *help/GenomicRegionsFindOverlap.html
229e861a5225a5d6f2f5b1c6ae2db48c *help/GenomicRegionsFromdataframe.html
4b393a2a9b911ae9a113a197e85464bd *help/GenomicRegionsFromfile.html
16bac6980583e169bcd8fbbb3e9bdbc3 *help/GenomicRegionsNumber,GenomicRegions-method.html
16bac6980583e169bcd8fbbb3e9bdbc3 *help/GenomicRegionsNumber.html
05f53893fc4f88d0ff7706182b957749 *help/GenomicRegionsSpan,GenomicRegions-method.html
05f53893fc4f88d0ff7706182b957749 *help/GenomicRegionsSpan.html
a63711dc83118d41917d89044e8b4379 *help/GenomicRegionsTotalSpan,GenomicRegions-method.html
a63711dc83118d41917d89044e8b4379 *help/GenomicRegionsTotalSpan.html
182b1d9baf02ffc3ecd4e2be1885ce32 *help/MergeStatisticAnnotations2DataForPREDA.html
63aa326ce9a8bbf522910021356ebcc3 *help/PREDA.rdb
519f03638ea1a2e6bfe7144c5d94c54e *help/PREDA.rdx
08f281aa589b0c7eaf7bb5a6eab7660b *help/PREDADataAndResults-class.html
09a1c1d367716d06da6deaedfc4aac3a *help/PREDADataAndResults2dataframe,PREDADataAndResults-method.html
09a1c1d367716d06da6deaedfc4aac3a *help/PREDADataAndResults2dataframe.html
1ba3e002c249c9e9093eb77302929189 *help/PREDAResults-class.html
3145ce5e9e7adfcd6df83200959d3db7 *help/PREDAResults2GenomicRegions,PREDAResults-method.html
3145ce5e9e7adfcd6df83200959d3db7 *help/PREDAResults2GenomicRegions.html
d52b451600c4053df7c96cbb398f975f *help/PREDAResults2GenomicRegionsSingle,PREDAResults-method.html
d52b451600c4053df7c96cbb398f975f *help/PREDAResults2GenomicRegionsSingle.html
7ccd3132ca5ef5dfa0d26eea9b090625 *help/PREDAResults2PREDADataAndResults,PREDAResults-method.html
7ccd3132ca5ef5dfa0d26eea9b090625 *help/PREDAResults2PREDADataAndResults.html
a97556a9c62c72bb88f5513d26c78a8a *help/PREDAResults2dataframe,PREDAResults-method.html
a97556a9c62c72bb88f5513d26c78a8a *help/PREDAResults2dataframe.html
f89304c5b4eb4ab99cee92eb2ff2cf35 *help/PREDAResultsGetObservedFlags,PREDAResults-method.html
f89304c5b4eb4ab99cee92eb2ff2cf35 *help/PREDAResultsGetObservedFlags.html
59d085b4f9642bcd299ed2124eca509e *help/PREDA_main.html
94be9fa48e54a0f154ca0976e3a0bd5b *help/SODEGIR_GEstatistics,ExpressionSet-method.html
94be9fa48e54a0f154ca0976e3a0bd5b *help/SODEGIR_GEstatistics.html
b690566c112e00ab5da8c7fae0c7ec04 *help/SODEGIRpreprocessingGE.html
9f3bb1246f3101eab55ee1d8b8835d5c *help/StatisticsForPREDA-class.html
8e4b82ab72c1facec4b374bc9db0720c *help/StatisticsForPREDA2dataframe,StatisticsForPREDA-method.html
8e4b82ab72c1facec4b374bc9db0720c *help/StatisticsForPREDA2dataframe.html
4ec7a2fe319c54175654bb53137e0161 *help/StatisticsForPREDAFilterColumns_neg,DataForPREDA-method.html
4ec7a2fe319c54175654bb53137e0161 *help/StatisticsForPREDAFilterColumns_neg,StatisticsForPREDA-method.html
4ec7a2fe319c54175654bb53137e0161 *help/StatisticsForPREDAFilterColumns_neg.html
d6c69bf95122433d17523defb6cb2ab5 *help/StatisticsForPREDAFilterColumns_pos,DataForPREDA-method.html
d6c69bf95122433d17523defb6cb2ab5 *help/StatisticsForPREDAFilterColumns_pos,StatisticsForPREDA-method.html
d6c69bf95122433d17523defb6cb2ab5 *help/StatisticsForPREDAFilterColumns_pos.html
771c950581b49f7fe4100b8b04837ed0 *help/StatisticsForPREDAFromdataframe.html
76fa720e073cc1683adbdc39e221dad7 *help/StatisticsForPREDAFromfile.html
0b8ad4e99a59bce116f7b526dd47f8f1 *help/aliases.rds
4680f38f2094b49ba43a1284ded0ad0b *help/analysesNames,PREDAResults-method.html
4680f38f2094b49ba43a1284ded0ad0b *help/analysesNames,StatisticsForPREDA-method.html
4680f38f2094b49ba43a1284ded0ad0b *help/analysesNames.html
c3c00caa1f7033f3ca7ed2e0cc23de56 *help/computeDatasetSignature,GenomicAnnotationsForPREDA-method.html
c3c00caa1f7033f3ca7ed2e0cc23de56 *help/computeDatasetSignature.html
f7ae1c2aeee0daa0b26f6fabbe5618b0 *help/eset2GenomicAnnotations,ExpressionSet-method.html
f7ae1c2aeee0daa0b26f6fabbe5618b0 *help/eset2GenomicAnnotations.html
ff50f797461663e73a3df52b7abf7d9a *help/genomePlot,GenomicAnnotationsForPREDA-method.html
ff50f797461663e73a3df52b7abf7d9a *help/genomePlot.html
ac1104e661307eed643febe225ae8610 *help/getStatisticByName,StatisticsForPREDA-method.html
ac1104e661307eed643febe225ae8610 *help/getStatisticByName.html
b9b6a065ec2a76ed6476a842a522fd6e *help/paths.rds
ef2802770fef7ac044cfb611426b0187 *help/preprocessingGE.html
a4c23892cabbf3191a580f73944cd95b *help/statisticsForPREDAfromEset,ExpressionSet-method.html
a4c23892cabbf3191a580f73944cd95b *help/statisticsForPREDAfromEset.html
70563812bb599d44ebda842cf1f8c600 *html/00Index.html
66af0ecd6b436411be4adc5f00986b51 *html/DataForPREDA-class.html
b03c86501bcd02648e0f126ea64905bc *html/DataForPREDA2GenomicAnnotationsForPREDA.html
81fdce02fa2c5e99809a1021ba1a782f *html/DataForPREDA2StatisticsForPREDA.html
e3c891abd884f60e120c0a8e3c53aabf *html/DataForPREDA2dataframe.html
e9a4bfa2f2e5715fcdd7edc3f277b70e *html/DataForPREDAMedianCenter.html
572ef712b5ca43439afb6c2cce681410 *html/GenomicAnnotations-class.html
130db84a904d1f74b3316cd5a46146bc *html/GenomicAnnotations2GenomicAnnotationsForPREDA.html
dcde99723c5a9a78a95e63b3fa68271b *html/GenomicAnnotations2dataframe.html
9ba8ef6b78f8a9f0d582188793c7af2f *html/GenomicAnnotations2reference_positions.html
fde341661cbe209c3ae786e773e4d4d7 *html/GenomicAnnotationsExtract.html
c465609c0dca57575e3641d20915d78c *html/GenomicAnnotationsFilter_neg.html
2765771c63bbc8e261b7f052d51b4256 *html/GenomicAnnotationsFilter_pos.html
e34cf87615e2567a6b6c3b920ae95457 *html/GenomicAnnotationsForPREDA-class.html
ee0ef76f84c17c0098afa73345ff3445 *html/GenomicAnnotationsForPREDA2GenomicAnnotations.html
b5a3819e838b71a97feffdef0461275a *html/GenomicAnnotationsForPREDA2PREDAResults.html
835c35f7c8ccbf29963a5b26b8d290af *html/GenomicAnnotationsForPREDA2dataframe.html
c61f9942ca728317392b8a219fe41133 *html/GenomicAnnotationsForPREDAFromfile.html
f9888907543c24e251c2aebcf03e2cd9 *html/GenomicAnnotationsFromLibrary.html
9c6a66d44109752db66555d7e787da50 *html/GenomicAnnotationsFromdataframe.html
29df2df2f36ce56916b25561342308c8 *html/GenomicAnnotationsFromfile.html
af64add853d8e63b27f0518b2b9ca472 *html/GenomicAnnotationsSortAndCleanNA.html
fd1d2141ebc1c4490dd9083f591f5b21 *html/GenomicRegions-class.html
d1bcbdc3f0cc8483a7688bc753537b72 *html/GenomicRegions2dataframe.html
79753fa0f7bf115ae0856a76d47e85af *html/GenomicRegionsAnnotate.html
6dba8127b1ee1914ecfc3af9489fac1d *html/GenomicRegionsChrNumber.html
a5f15f7a4579c6c5c7bc0bf8f36e6b00 *html/GenomicRegionsComparison.html
e616e0671575fe25421a64a9314fb524 *html/GenomicRegionsCreateRegionsIds.html
36f32f9de088886d314903ae34d84d36 *html/GenomicRegionsFilter_neg.html
15a5805015f2d57b5d49713789a4d8f5 *html/GenomicRegionsFilter_pos.html
d6bf63108fae510158e7d3e2eedd95c4 *html/GenomicRegionsFindOverlap.html
1631499a2d82af520d3b443d28422922 *html/GenomicRegionsFromdataframe.html
cc60f749111bbfda5340e3ed99d771bd *html/GenomicRegionsFromfile.html
82d3e8dafeea721e3579930c7becfb71 *html/GenomicRegionsNumber.html
0dcf28b7ec6b69a9062ea56dd4190064 *html/GenomicRegionsSpan.html
00588f567324cb5135e3ef64a3b16897 *html/GenomicRegionsTotalSpan.html
c5e1308eecef8d7b6892ef9085e359ed *html/MergeStatisticAnnotations2DataForPREDA.html
e058cabf3fc6df881a00a24bee93389a *html/PREDADataAndResults-class.html
d7954783941157b79e87db830b07861e *html/PREDADataAndResults2dataframe.html
d0b15885a53e262b8c3d351474aef083 *html/PREDAResults-class.html
2d864a9e07c97c7d0406413b965c785a *html/PREDAResults2GenomicRegions.html
767acce896d6c8336dfeb851524b8f7b *html/PREDAResults2GenomicRegionsSingle.html
165739e9b915f7e0214e918861c34bb5 *html/PREDAResults2PREDADataAndResults.html
0f7edc2a83a6c314e677af54758cd473 *html/PREDAResults2dataframe.html
0bc03d84006c1833ced2baa15ce8c2e4 *html/PREDAResultsGetObservedFlags.html
7c830f68050e5dc92e6e7485c8979f5c *html/PREDA_main.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
9102799f18862d1d480997357fe1f7c1 *html/SODEGIR_GEstatistics.html
137c21fdb1e0dd245ae8afd763cf3cd4 *html/SODEGIRpreprocessingGE.html
e8b6569f58aa8ee51815075326cd6b62 *html/StatisticsForPREDA-class.html
630d5eba18f72d13192a53fb27f981b5 *html/StatisticsForPREDA2dataframe.html
32b8495f1a159d1e9b93262e93a0f732 *html/StatisticsForPREDAFilterColumns_neg.html
1d01f1ead8784aebb5e75b6cffae071b *html/StatisticsForPREDAFilterColumns_pos.html
77517c3c5fb875ef8675a8f3bcbc87f1 *html/StatisticsForPREDAFromdataframe.html
71a557ad3acadcf4edaa7c871ab06370 *html/StatisticsForPREDAFromfile.html
14b4354856f0d2caf01a0807a39c6ba6 *html/analysesNames.html
f08ee98d31692c3506e21b40783539a1 *html/computeDatasetSignature.html
af6592cc3d7550408aae34a2680a84f2 *html/eset2GenomicAnnotations.html
90e405411b32210dcadf606f7598dab6 *html/genomePlot.html
88f93bcd11d9ebf1581185e16e455dd5 *html/getStatisticByName.html
6732477d8a6645562d5ca3ce9e8f06bd *html/preprocessingGE.html
9928638b397c317c62183dca5538d9f3 *html/statisticsForPREDAfromEset.html
