% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/data-soybean_cn_sub_metrics.R
\docType{data}
\name{soybean_cn_sub_metrics}
\alias{soybean_cn_sub_metrics}
\title{Normalized and subsetted soybean cotyledon metrics}
\format{a \code{RData} instance, List with one list element per treatment
group combination and 1 row per gene}
\usage{
data(soybean_cn_sub_metrics)
}
\description{
This data contains metrics for normalized RNA-sequencing read
counts from soybean cotyledon across three time stages of development. 
Early stage cotyledons were collected four days after planting and were 
green but closed. Middle stage cotyledons were collected while green and 
open, soon after the plant generated its first set of unifoliate leaves. 
Late stage cotyledons were collected immediately after the initiation of 
yellowing and shrinking. The metrics include the log fold change, log 
counts per million, likelihood ratio, p-values, and FDR values for all 
genes and all pairwise combinations of treatment groups. To save on size, 
this example dataset was generated by obtaining a random subset of 1 out 
of 10 genes from the original resource.
}
\details{
Normalized and subsetted soybean cotyledon metrics

\itemize{
\item ID gene name
\item logFC log fold change
\item logCPM log counts per million
\item LR likelihood ratio
\item PValue p-value
\item FDR FDR value
}
}
\seealso{
\code{\link{soybean_cn_sub}} for information about the treatment 
groups
}
\keyword{datasets}
