ddpcrPlate-class {twoddpcr}R Documentation

An S4 class for multiple wells in a ddPCR experiment.

Description

An S4 class for multiple wells in a ddPCR experiment.

The constructor for the ddpcrPlate class.

Usage

ddpcrPlate(wells)

## S4 method for signature 'list'
ddpcrPlate(wells)

## S4 method for signature 'ddpcrPlate'
ddpcrPlate(wells)

## S4 method for signature 'character'
ddpcrPlate(wells)

## S4 method for signature 'missing'
ddpcrPlate(wells)

## S4 method for signature 'ddpcrPlate'
show(object)

Arguments

wells

Either:

  • a list of ddpcrWell objects,

  • a list of data frames of droplet amplitudes, or

  • a character vector corresponding to a file path(s) containing CSV files of raw droplet amplitude data.

object

Any R object

Value

A ddpcrPlate object with the given wells.

Author(s)

Anthony Chiu, anthony.chiu@cruk.manchester.ac.uk

Anthony Chiu, anthony.chiu@cruk.manchester.ac.uk

Examples

## A \code{ddpcrPlate} object can be created from data from a list of data 
## frames.
ddpcrPlate(KRASdata)

## A directory (or individual files) of droplet amplitude CSVs can also be 
## loaded.
moreAmpsDir <- system.file("extdata", "more-amplitudes", package="twoddpcr")
ddpcrPlate(moreAmpsDir)
[Package twoddpcr version 1.11.0 Index]