setMotifs {transite}R Documentation

Set Transite motif database

Description

Globally sets Transite motif database, use with care.

Usage

setMotifs(value)

Arguments

value

list of Motif objects

Value

void

See Also

Other motif functions: generateIUPACByKmers, generateIUPACByMatrix, generateKmersFromIUPAC, getMotifById, getMotifByRBP, getMotifs, getPPM, initIUPAClookupTable, motifsMetaInfo

Examples

custom.motif <- createKmerMotif(
  "custom.motif", "RBP1",
  c("AAAAAAA", "CAAAAAA"), "HITS-CLIP",
  "Homo sapiens", "user"
)
setMotifs(list(custom.motif))
[Package transite version 1.5.0 Index]