rotate_dimensions,SummarizedExperiment-method {tidybulk}R Documentation

rotate_dimensions

Description

rotate_dimensions

Usage

## S4 method for signature 'SummarizedExperiment'
rotate_dimensions(
  .data,
  dimension_1_column,
  dimension_2_column,
  rotation_degrees,
  .element = NULL,
  of_samples = TRUE,
  dimension_1_column_rotated = NULL,
  dimension_2_column_rotated = NULL,
  action = "add"
)

Arguments

.data

A 'tbl' formatted as | <SAMPLE> | <TRANSCRIPT> | <COUNT> | <...> |

dimension_1_column

A character string. The column of the dimension 1

dimension_2_column

A character string. The column of the dimension 2

rotation_degrees

A real number between 0 and 360

.element

The name of the element column (normally samples).

of_samples

A boolean. In case the input is a tidybulk object, it indicates Whether the element column will be sample or transcript column

dimension_1_column_rotated

A character string. The column of the rotated dimension 1 (optional)

dimension_2_column_rotated

A character string. The column of the rotated dimension 2 (optional)

action

A character string. Whether to join the new information to the input tbl (add), or just get the non-redundant tbl with the new information (get).

Value

A 'SummarizedExperiment' object

[Package tidybulk version 0.99.23 Index]