R: Feature profile class

feature_profile {structToolbox}

R Documentation

Feature profile class

Description

Scatter plot of a feature against measurement order with limits for samples and quality control samples.

Usage

feature_profile(
  run_order,
  qc_label,
  qc_column,
  colour_by,
  feature_to_plot,
  ...
)

Arguments

`run_order`	the sample_meta column containing the measurement order of the samples
`qc_label`	the label used to identify QC samples
`qc_column`	the sample_meta column containing the QC labels
`colour_by`	the sample_meta column to use to colour the plot
`feature_to_plot`	the column id of the feature to plot
`...`	additional slots and values passed to struct_class

Value

struct object

Examples

D = MTBLS79_DatasetExperiment()
C = feature_profile(run_order='sample_order',
    qc_label='QC',
    qc_column='class',
    colour_by='class',
    feature_to_plot=1)
chart_plot(C,D)

[Package structToolbox version 0.99.8 Index]