cxds_getTopPairs {scds} | R Documentation

## Extract top-scoring gene pairs from an SingleCellExperiment where cxds has been run

### Description

Extract top-scoring gene pairs from an SingleCellExperiment where cxds has been run

### Usage

    cxds_getTopPairs(sce, n = 100)

### Arguments

`sce` | single cell experiment to analyze; needs "counts" in assays slot.
`n` | integer. The number of gene pairs to extract. Default: 100

### Value

matrix Matrix with two colulmns, each containing gene indexes for gene pairs (rows).

[Package scds version 1.3.0 Index]