Some global options for openCyto See examples for the meaning of these options and how to get/set them.

Description

Get/set some global options for openCyto

Examples

opt <- getOption("openCyto")
#the threshold of minimum cell events required for the gating algorithm to proceed
opt[["gating"]][["minEvents"]]
#to change the threshold
opt[["gating"]][["minEvents"]] <- 100
options(openCyto = opt)

#switch off the validity check flags(Not recommended)
opt[["check.pop"]] <- FALSE
options(openCyto = opt)