| image {oligo} | R Documentation |
Produces a pseudo-image (graphics::image) for each sample.
## S4 method for signature 'FeatureSet'
image(x, which, transfo=log2, ...)
## S4 method for signature 'PLMset'
image(x, which=0,
type=c("weights","resids", "pos.resids","neg.resids","sign.resids"),
use.log=TRUE, add.legend=FALSE, standardize=FALSE,
col=NULL, main, ...)
x |
|
which |
integer indices of samples to be plotted (optional). |
transfo |
function to be applied to the data prior to plotting. |
type |
Type of statistics to be used. |
use.log |
Use log. |
add.legend |
Add legend. |
standardize |
Standardize residuals. |
col |
Colors to be used. |
main |
Main title. |
... |
parameters to be passed to |
if(require(oligoData) & require(pd.hg18.60mer.expr)){
data(nimbleExpressionFS)
par(mfrow=c(1, 2))
image(nimbleExpressionFS, which=4)
## fit <- fitPLM(nimbleExpressionFS)
## image(fit, which=4)
plot(1) ## while fixing fitPLM TODO
}