R: Distance correlation

distanceCorrelation {methimpute}

R Documentation

Distance correlation

Description

Compute the distance correlation from a methimputeData object.

Usage

distanceCorrelation(data, distances = 0:50, separate.contexts = FALSE)

Arguments

`data`	A `methimputeData` object.
`distances`	An integer vector specifying the distances for which the correlation will be calculated.
`separate.contexts`	A logical indicating whether contexts are treated separately. If set to `TRUE`, correlations will only be calculated between cytosines of the same context.

Value

A list() with an array containing the correlation values and the corresponding ggplot.

Examples

## Get some toy data
file <- system.file("data","arabidopsis_toydata.RData",
                    package="methimpute")
data <- get(load(file))
distcor <- distanceCorrelation(data)
print(distcor$plot)

[Package methimpute version 1.9.0 Index]