oncostrip {maftools}R Documentation

draw an oncostrip similar to cBioportal oncoprinter output.

Description

draw an oncostrip similar to cBioportal oncoprinter output.

Usage

oncostrip(maf = NULL, ...)

Arguments

maf

an MAF object generated by read.maf

...

arguments passed oncoplot

Details

This is just a wrapper around oncoplot with drawRowBar and drawColBar set to FALSE

Value

None.

See Also

oncoplot

Examples

laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools")
laml <- read.maf(maf = laml.maf)
dev.new()
oncostrip(maf = laml, genes = c('NPM1', 'RUNX1'))
[Package maftools version 2.3.30 Index]