b4d0858b7a50534150c713036c926e54 *CITATION
263888f81ee5a09d6289eb7ac555b9fb *DESCRIPTION
d10acc9933903a3beb9527841640a16f *INDEX
0e3cbb60e16b5de6f7033a580b12c763 *Meta/Rd.rds
233d22e439567e21d25acfb129f7d3b5 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
b58ff5a14e64b8ca50570ddb6bedc2d4 *Meta/hsearch.rds
48cbd46137127d845e11d52fca99da82 *Meta/links.rds
f96250ac04d6a85a76ca4b71ad46296c *Meta/nsInfo.rds
333c9750f4d6c758f0da7332d90ac6a2 *Meta/package.rds
cceb23e9b67e7e67679ca3d1d84d4b42 *Meta/vignette.rds
c57cb37009a2ae19f6fef02250ed3bc0 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/h5vc
e0fc14819a217c52479932bf4bd1bd47 *R/h5vc.rdb
17975606ae2908ccf06a671773b3fcec *R/h5vc.rdx
c2945e1af51fac5b5c325587ab05a31c *data/bases.rda
09991dd1e000f55b142821da4df6de9f *doc/bioc_adapted.css
6013a5835826bd22900b7124141b601b *doc/h5vc.simple.genome.browser.R
22397e70b40c7a5d1efd37dd698da5fa *doc/h5vc.simple.genome.browser.Rmd
7ab1a764a16c1b3e222fbba70b8113b4 *doc/h5vc.simple.genome.browser.html
c8ec695a907833435e1478b9da8f60ce *doc/h5vc.tour.R
936d850c0861bdb179783b4387b37b20 *doc/h5vc.tour.Rmd
7981425759b66aa84e45ca00a9a697b2 *doc/h5vc.tour.html
545fdac6d5c2ad6a1de9bd34bd6123ad *doc/index.html
6f20698e2dc24d91e482234834b83225 *help/AnIndex
80042c3083277b053536ba34517ace93 *help/aliases.rds
434571d705ba478425f6cc6e37361bcd *help/h5vc.rdb
7ac71b787dfcfe71e7298b15d40285b6 *help/h5vc.rdx
21b92b6af005e6999e9c577d92dad07f *help/paths.rds
4a89986607a798817d4d7b3c3fa7e178 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
792a4e88e7ffa3a51a1069882c217977 *html/applyTallies.html
22add1854d08fd1c924e3cd8e5ebb434 *html/batchTallies.html
6bb3e2bb3c740ce55a66d105ea2ef471 *html/binGenome.html
77fe88dbf245c6a25bc1300a47a441c8 *html/binnedAFs.html
bcb1e5f948a0f87d17f5ed79a5d1a116 *html/callVariants.html
ae0541220a13d78feb5617fb8b226e3b *html/callVariantsFisher.html
45560cd3dfcc1e0796ecaf0b8b4ba64b *html/callVariantsSingle.html
045e397d20ff45395ebf8ad4683fdd0b *html/coverage.html
f0f21e43c73566ac82bc556522cbc984 *html/geom_h5vc.html
7088fdfc5655d32e5e87ba5f779c2e3b *html/getSampleData.html
4aadc9c169cfe17831a5d28ccb0fec30 *html/h5dapply.html
51232cc21f20b497d6f959fce69c85d5 *html/h5readBlock.html
aa37d1b6c3d33ad1eb632949c1b7c574 *html/h5vc-package.html
b12d9e95c65f7eb88c26813c0af1f3e3 *html/helpers.html
2b9559171ca11ef5e22a6ab5b04e5231 *html/mergeTallies.html
2030db796caf966d749131d7098457b8 *html/mergeTallyFiles.html
0de25e1adcaf5061bb9d48f943676d37 *html/mismatchPlot.html
23262b01631acb7269c0849e5f3aa3f3 *html/mutationSpectrum.html
9ed9f10f32c7f54e454186bbbe612c12 *html/plotMutationSpectrum.html
f621de72683d38b48c3722d853d4ab85 *html/prepareForHDF5.html
12b2a698860ce866dac0e34fd04da765 *html/prepareTallyFile.html
739e263e4f8c4128ce36d6cf70c62477 *html/tallyBAM.html
504e15fc183a0a871237b9c3927a1431 *html/tallyRanges.html
51c4cf245a5658404ddbf269f079574c *html/writeReference.html
3a89c093ec10ddb3cc4cb9091270f9e5 *html/writeToTallyFile.html
79c76fb6aa235af8dd65a45eae3252d4 *libs/i386/h5vc.dll
aa018200f6842b50d9eb58e7a5088df4 *libs/x64/h5vc.dll
73ceca9b4a72b1a83d37905ad4d3a529 *unitTests/expected.counts.txt
0a627b8638aee4ce1659079fc42c0946 *unitTests/insert.bam
ef4f5cd7f5833fc619d370bc0f94459e *unitTests/insert.bam.bai
a862e66c570a6d9f7e4d3f00031c5b9d *unitTests/test_tallyBAM.R
