R: Compute the positions of the population statistics based on...

stat_position {ggcyto}

R Documentation

Compute the positions of the population statistics based on the geometic gate centroid for a ggcyto plot.

Description

It is usually not called directly by user but mainly used by compute_stats function (which is called by ggcyto add method when geom_states layer is added).

Usage

stat_position(gate, ...)

Arguments

`gate`	a flowCore filter
`...`	other arguments
`adjust`	adjust the position of the centroid
`abs`	logical
`data_range`	the actual data range

Value

a data.table of gate centroid coordinates

Examples

data(GvHD)
fs <- GvHD[1:4]
rect.g <- rectangleGate(list("FSC-H" =  c(300,500), "SSC-H" = c(50,200)))
rect.gates <- sapply(sampleNames(fs), function(sn)rect.g)
stat_position(rect.gates)

[Package ggcyto version 1.15.2 Index]