SingleRepReport {esATAC} | R Documentation

## Final report for single group of regions

### Description

When user call all steps in the pipeline, the final report can be generated.

### Usage

    atacSingleRepReport(prevStep, htmlOutput = NULL, ...)

    ## S4 method for signature 'Step'
    atacSingleRepReport(prevStep, htmlOutput = NULL, ...)

### Arguments

`prevStep` | `Step-class` object scalar. Any steps object in this package is acceptable when the pipeline is ready.
`htmlOutput` | `Character` scalar. HTML report file directory Default: NULL ("Report.html")
`...` | Additional arguments, currently unused.

### Details

The report is HTML format. All link in HTML file is the relative directory in report step folder and other step folder If user want to move HTML file and keep all link access available, they should move the whole pipeline folder at the same time.

### Value

An invisible `ATACProc-class` object (`Step-class` based) scalar for downstream analysis.

### Author(s)

Zheng Wei

### See Also

`atacPipe`

[Package esATAC version 1.9.3 Index]