CreateExtendedAdjacency {epiNEM} | R Documentation

## Create an extended adjacency matrix

### Description

extend adjacency matrices taking cycles and logics into account. For every given start state, the final state is computed yu using BoolNet.

### Usage

    CreateExtendedAdjacency(network, mutants, experiments)

### Arguments

`network` | network created by BoolNet from file
`mutants` | vector of single knockouts
`experiments` | vector of all knockouts

### Value

extended adjacency matrix

### Examples

    library(BoolNet)
    data(cellcycle)
    extModel <- CreateExtendedAdjacency(cellcycle,
    c(cellcycle$genes, "CycD.Rb"), cellcycle$genes)

[Package epiNEM version 1.11.11 Index]