R: Reverse complement DNA sequences.

rc {dada2}

R Documentation

Reverse complement DNA sequences.

Description

This function reverse complements DNA sequence(s) provided. This function is nothing more than a concisely-named convenience wrapper for reverseComplement that handles the character vector DNA sequences generated in the the dada2 package.

Usage

rc(sq)

Arguments

`sq`	(Required). `character`. The DNA sequence(s) to reverse-complement. `DNAString`, or `DNAStringSet` formats are also accepted.

Value

character. The reverse-complemented DNA sequence(s).

Examples

R1492 <- "RGYTACCTTGTTACGACTT"
rc(R1492)
sqs <- getSequences(system.file("extdata", "example_seqs.fa", package="dada2"))
rc(sqs)