07ab8c1a9f8a50d44c0a948a9d42ec7e *CITATION
abc9aa1b068c33efcf5c3805e38567db *DESCRIPTION
391f19e710140c38f44d8075d386e665 *INDEX
06e9d8b8f4217f692529c4e53542e156 *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
f1970c111aaf7a978fb5737851417678 *Meta/hsearch.rds
936a100163c78ffc4bdfebc220b0be10 *Meta/links.rds
b7e240d617930b44e94111a3f75eb9e8 *Meta/nsInfo.rds
95ed57d3b5429a3c6b90b9094bf885ab *Meta/package.rds
8314c2714f831df1c9551f2687e53ff8 *Meta/vignette.rds
25785db5cc9d4ca3063e36e8930b25e5 *NAMESPACE
37b6654ef28dc31b509c3649bd7e2f43 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/customProDB
46704cf248de05f0a363172f4a8c3bfe *R/customProDB.rdb
bbb997e0afe07d9feb0980a202d47fdd *R/customProDB.rdx
9d11f86c047a1810450b37798575f8bb *doc/customProDB.R
12db97e4ef9b2e928eeb9b3966950d68 *doc/customProDB.Rnw
bb560e08c1d5a412df3104f0a1e668f0 *doc/customProDB.pdf
8fd72a5901591709623e700fa572d239 *doc/index.html
ff6a068e7b4562eb594fa55b7095e368 *extdata/bams/test1_sort.bam
ab67676c326c959cd7fd2c015fe43ecf *extdata/bams/test1_sort.bam.bai
8344f2dbd4827a68ca402168722643da *extdata/bams/test2_sort.bam
1e22c8e2b7302cf72350bd6677a38e4c *extdata/bams/test2_sort.bam.bai
e60dd9c6071f873461d6414a1bf22ded *extdata/bams/test3_sort.bam
7e5cbe91fafc7d08f479d1bdbf5501fd *extdata/bams/test3_sort.bam.bai
70a0b41a9d6105a5d7828f710a110112 *extdata/beds/junctions1.bed
af3d1b708f46275b63ef6408fbb2b310 *extdata/beds/junctions2.bed
c18472db28002552348382aeeaf46e28 *extdata/beds/junctions3.bed
711f95cacceb8d88a14969be455a57a2 *extdata/refseq/cosmic.RData
b7d466b72e98762dda61f3ddce52d57f *extdata/refseq/dbsnpinCoding.RData
0415b426b58bf6d77829b78155285a1b *extdata/refseq/exon_anno.RData
a4c824752b35109a6951ae6cd83b3bc4 *extdata/refseq/ids.RData
715499b3f2148ebec11f50af15fca781 *extdata/refseq/procodingseq.RData
3e6a7c60a7a5fc1787a8205ffd3eb9e5 *extdata/refseq/proseq.RData
29a377ba3a01347a27e8bdc1053c96bc *extdata/refseq/splicemax.RData
341b8507da3a0345c52505525577a2e3 *extdata/refseq/txdb.sqlite
9e9ea25593d6dff684ae411b999fdda6 *extdata/refseq_coding_seq.fasta
ac9339b036da666a3ecdf39b83c06ca6 *extdata/refseq_pro_seq.fasta
394854d152a49775d8bbdb1431dd3c63 *extdata/test_mul.vcf
be3edb220ac58360aeb2db168e6f0cbd *extdata/tmp/test_indel.fasta
79d7fbc7ce8526415f2ca926a967fdaa *extdata/tmp/test_junc.fasta
859042c8502b02a2a401473062330b09 *extdata/tmp/test_rpkm.fasta
92476f93183e7f1a6a9e244ed51a0adb *extdata/tmp/test_snv.fasta
a63ce322af4afe9bebc04312f9cff3c8 *extdata/tmp/test_snv.tab
1a87eb44b5e9d9ed36718422a3d6804e *extdata/vcfs/test1.vcf
49763e2078a780b127bff285658403a6 *extdata/vcfs/test2.vcf
e057764e5e4e743bfb8f398698d31834 *extdata/vcfs/test3.vcf
bfbb508b0c5501a68f3b84360d0b9734 *help/AnIndex
ef379e498721fe7a70b48caf424b03fd *help/aliases.rds
da3cf0d56a4ec68121a2e53c385dc3e3 *help/customProDB.rdb
58975d42e4f5170b43f5e88963c2b388 *help/customProDB.rdx
93628c3e0e476e2f9989237f68f89f1f *help/paths.rds
91fac897a1fb281609120c78017db2f8 *html/00Index.html
a6f292075a77ef074aceda5b69b74c2d *html/Bed2Range.html
b4e61c87dfe874064d89ba20b2270c57 *html/InputVcf.html
bfbe0eb67f008c03e1ab559d042dfeb4 *html/JunctionType.html
3ef6931c32e6d52787fa61358c73ebfa *html/Multiple_VCF.html
dba447f92ddf677d21176f38e749931a *html/OutputNovelJun.html
50871b84f35fc3bfe81e1261a6a7d06c *html/OutputVarprocodingseq.html
23f27f2f68283f7d6bce2c0a90c8cf61 *html/OutputVarproseq.html
013ff89f2a356f2a371314257a72fdf4 *html/OutputVarproseq_single.html
b493d58f06e646288675c67eb43746aa *html/Outputaberrant.html
6e02cc0f7bd673b9c7fb0a2555c3e08d *html/Outputproseq.html
9431db79a51f16ec76c84b35887431f9 *html/OutputsharedPro.html
f374ff90471af61ef3edff8cda162402 *html/Positionincoding.html
c959bb4bdc884f55f3bacd66a05ca2f0 *html/PrepareAnnotationEnsembl.html
4d2d38a18dd7ea716af462a57e953117 *html/PrepareAnnotationRefseq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
90dafb52b856e622484f66d6dd34fbc0 *html/SharedJunc.html
790d38ac0b3700135b4d8c53093cd735 *html/Varlocation.html
eee58b6876ff6157384e6e64d93c92cc *html/aaVariation.html
c6ec182f9bdabb8ed1dedf7c821578dc *html/calculateRPKM.html
b19e1685394f19f221a87f82c13d78d0 *html/easyRun.html
aeede9bf2d2af114976d3af37dc331ea *html/easyRun_mul.html
