TSS {compEpiTools} | R Documentation

## based on a TxDb returns a GRanges with the TSS positions for all transcripts

### Description

based on a TxDb returns a GRanges of width 1 with the TSS positions for all transcripts

### Usage

    TSS(txdb)

### Arguments

`txdb` | An object of class TxDb

### Details

based on a TxDb returns a GRanges of width 1 with the TSS positions for all transcripts

### Value

A GRanges

### References

http://genomics.iit.it/groups/computational-epigenomics.html

### Examples

    require(TxDb.Mmusculus.UCSC.mm9.knownGene)
    txdb <- TxDb.Mmusculus.UCSC.mm9.knownGene
    res <- TSS(txdb)
    res[1:2]

[Package compEpiTools version 1.21.1 Index]