description of cobindR or configuration object

Description

description of cobindR or configuration object

Usage

## S4 method for signature 'configuration'
experiment_description(x)
## S4 replacement method for signature 'configuration,character'
experiment_description(x) <- value
## S4 method for signature 'cobindr'
experiment_description(x)
## S4 replacement method for signature 'cobindr,character'
experiment_description(x) <- value

Arguments

Value

experiment description (character)

Author(s)

Rob Lehmann <r.lehmann@biologie.hu-berlin.de>

See Also

id,experiment_description,sequence_source,sequence_origin,sequence_type,bg_sequence_source,bg_sequence_origin,bg_sequence_type,species,downstream,upstream,max_distance,pairs,pfm_path,threshold,fdrThreshold,path,mart,pValue

Examples

cfg <- cobindRConfiguration()

experiment_description(cfg)

sequence_type(cfg) <- 'fasta'
sequence_source(cfg) <- system.file('extdata/sox_oct_example_vignette_seqs.fasta',package='cobindR')
sequence_origin(cfg) <- 'Mouse Embryonic Stem Cell Example ChIP-Seq Oct4 Peak desc'
cbr <- cobindr(cfg)

experiment_description(cbr)