ad2a33642d92edc12c3c9b919fd385f2 *CITATION
3b934e64558a0605d8b6b4944a252283 *DESCRIPTION
a7f667224fe274f052aa76852f4facfa *INDEX
8eea64b2a3a38ec3fc0299b433abc407 *LICENSE
c3beb807ceba22b1a5125fd4b91dd0f9 *Meta/Rd.rds
a5df994459d029157346a6bb12baf742 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
184f063854da3606c9a4cfcf9e89d027 *Meta/hsearch.rds
0b388559de82e26618c017bae5293050 *Meta/links.rds
454e63b583c0966f20caf0373e7299f7 *Meta/nsInfo.rds
f5373f86f002df2848db046c3b988ff2 *Meta/package.rds
68f32ac1d28d5dc2a056ca4c1c318353 *Meta/vignette.rds
7383d810ae69d42bc03b94039f7164fd *NAMESPACE
d41d8cd98f00b204e9800998ecf8427e *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/cicero
0aa8f25641804a549d6073fa4d74a358 *R/cicero.rdb
81ed4c47de69ecf0161960eddada97fa *R/cicero.rdx
75e7b009f7845f348d4ab9cacda668ad *data/cell_data.rda
61c421525ca55a0be2edecee76fbea45 *data/cicero_data.rda
ac933930b3316f6feb2eff1c34a05e1b *data/gene_annotation_sample.rda
c4a5edd58537fd8324bd327ab754d420 *data/human.hg19.genome.rda
d97344cd5f469204923469ef3844dc54 *doc/index.html
4bad96ba4ba9947dd253147ea2de1711 *doc/website.R
8b643f29e046ca106d721c4687dab419 *doc/website.Rmd
d38051d6b832df9bd205cf807061a3fa *doc/website.html
2c97823a5963b338d6a49914326570db *help/AnIndex
a407aaee5412fe1f5499483baebe43c2 *help/aliases.rds
a4e4a0b086753a8ca75291538382c57c *help/cicero.rdb
feeae22520eb490edc193518f298a5cf *help/cicero.rdx
6158bd6313ae9c3a7bcb1c74337aa3cf *help/paths.rds
863316598fbd89d5b6be51d70c2d8e87 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
34101e93786f0609d2a2dcc207f9c01b *html/aggregate_by_cell_bin.html
79354ff074a4d647c429eca39fcf3b2b *html/aggregate_nearby_peaks.html
9c875ec3e0e327d78e64bd64a666902d *html/annotate_cds_by_site.html
3dcb13233b6256d48c298ce148d13a99 *html/assemble_connections.html
8c3efc5f51a3f05e7140dbdf70445cd7 *html/build_gene_activity_matrix.html
3d8bfca96cb9445f80a1a65f1d935359 *html/cell_data.html
84a05c585087f9d06306c4a38597c467 *html/cicero-package.html
5653d8a209548f282dafe85a261217a9 *html/cicero_data.html
04c6558be995c1e9bf1903b3228d54d9 *html/compare_connections.html
209e1ccaa1e43deff18aa6fc420a8b2c *html/df_for_coords.html
10a4a7793c7c157f4bd1ef78feb10613 *html/estimate_distance_parameter.html
c3c2b5cd40a5bc6391d98bfb8e682b4e *html/find_overlapping_ccans.html
dca9f300f9ade1d9f4a54d79da0e4e34 *html/find_overlapping_coordinates.html
494e84101c2a44a4c353cd55ba69b9f6 *html/gene_annotation_sample.html
e9f583bab11276a717601e8eb70bc33e *html/generate_ccans.html
61ecf175cf45d9194973694d029384dd *html/generate_cicero_models.html
825a9323b660fbc41df53dbe18d9f288 *html/human.hg19.genome.html
dbc523a0f2fb4b5cd60b5426f0e342d5 *html/make_atac_cds.html
c49b974cd647520e9e8d8137feeffd7e *html/make_cicero_cds.html
5660ca962354e75ed739fdbd14c47ad2 *html/make_sparse_matrix.html
860973b91ac8a9b7102e3fdb21885d76 *html/normalize_gene_activities.html
1565f1b7b57e973973ee63eb335a0bca *html/plot_accessibility_in_pseudotime.html
8c8fc4f9bf386c4a93120c14d165e4db *html/plot_connections.html
1fbd5aaec932ca81869ba2665c73c4ba *html/ranges_for_coords.html
e69b75d62695ce2b27b185fefa909831 *html/run_cicero.html
