showBioNetNodesLayout {caOmicsV}R Documentation

Display Nodes Layout of caOmicsV bioNetCircos Plot

Description

Display bioNetCircos layout with empty nodes and edges in order to optimize bioNetCircos layout. An igraph object must be initialized first.

Usage

    showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))

Arguments

bgColor

character vector for a color name or a R color specification

Value

None

Author(s)

Henry Zhang

Examples

    data(bionetPlotDemoData)
    expr <- bionetPlotDemoData$heatmapData[[1]]
    bioNet <- bc3net(expr)

    initializeBioNetCircos(bioNet, totalSamples=60)
    showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))
[Package caOmicsV version 1.17.0 Index]