| plotScatter {Starr} | R Documentation |
A matrix of pairwise scatterplots is created. The lower panle shows the correlation of the data.
plotScatter(eSet, density=F, cluster=T, sample=NULL, cex=1)
eSet |
an ExprssionSet or matrix, containing the data |
density |
if TRUE, a density scatter plot is plotted. This plot shows the density of the data. |
sample |
An integer, indicating the number of subsamples to take for the density scatterplot. This is only recommended if the data is very large, as the density computation takes some time. |
cluster |
if cluster=T, the experiments are clustered and similiar experiments are plotted together. |
cex |
see ?par |
Benedikt Zacher zacher@lmb.uni-muenchen.de
##
points <- 10^4
x <- rnorm(points/2)
x <- c(x,x+2.5)
x <- sign(x)*abs(x)^1.3
y <- x + rnorm(points,sd=0.8)
mat <- matrix(c(x,y), ncol=2)
colnames(mat) <- c("a", "b")
plotScatter(mat, density=TRUE)