splitPCRhit {SPLINTER} | R Documentation

## splitPCRhit

### Description

splits the PCR alignment into the two AS conditions

### Usage

    splitPCRhit(res, hitlist)

### Arguments

`res` | result from `getPCRsizes`
`hitlist` | `findCompatibleEvents` object

### Value

list of 2 data.frame objects with isoform name (ID) and length of PCR product (bp) matching Type 1 or Type 2 transcripts

### Author(s)

Diana Low

### Examples

    ## as getPCRsizes gives you all PCR bands when the primers are used,
    ## splitPCRhit will determine which bands are relevant to the target
    relevant_pcr_bands<-splitPCRhit(pcr_result1,compatible_tx)

[Package SPLINTER version 1.13.3 Index]