# Generated by roxygen2: do not edit by hand

S3method(select_,tbl_organism)
S3method(src_tbls,src_organism)
S3method(tbl,src_organism)
export(AccnumFilter)
export(AliasFilter)
export(CdsChromFilter)
export(CdsIdFilter)
export(CdsNameFilter)
export(CdsStrandFilter)
export(EnsemblFilter)
export(EnsemblprotFilter)
export(EnsembltransFilter)
export(EnzymeFilter)
export(EvidenceFilter)
export(EvidenceallFilter)
export(ExonChromFilter)
export(ExonStrandFilter)
export(FlybaseCgFilter)
export(FlybaseFilter)
export(FlybaseProtFilter)
export(GeneChromFilter)
export(GeneStrandFilter)
export(GoFilter)
export(GoallFilter)
export(IpiFilter)
export(MapFilter)
export(MgiFilter)
export(OmimFilter)
export(OntologyFilter)
export(OntologyallFilter)
export(PfamFilter)
export(PmidFilter)
export(PrositeFilter)
export(RefseqFilter)
export(TxChromFilter)
export(TxStrandFilter)
export(TxTypeFilter)
export(UnigeneFilter)
export(WormbaseFilter)
export(ZfinFilter)
export(cds)
export(cdsBy)
export(cdsBy_tbl)
export(cds_tbl)
export(exons)
export(exonsBy)
export(exonsBy_tbl)
export(exons_tbl)
export(fiveUTRsByTranscript)
export(fiveUTRsByTranscript_tbl)
export(genes)
export(genes_tbl)
export(hg38light)
export(intronsByTranscript)
export(intronsByTranscript_tbl)
export(mm10light)
export(promoters)
export(promoters_tbl)
export(select_tbl)
export(src_organism)
export(src_ucsc)
export(supportedOrganisms)
export(threeUTRsByTranscript)
export(threeUTRsByTranscript_tbl)
export(transcripts)
export(transcriptsBy)
export(transcriptsBy_tbl)
export(transcripts_tbl)
exportClasses(BasicFilter)
exportMethods(columns)
exportMethods(keys)
exportMethods(keytypes)
exportMethods(mapIds)
exportMethods(orgPackageName)
exportMethods(select)
exportMethods(seqinfo)
exportMethods(show)
exportMethods(supportedFilters)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,dbfile)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,keytypes)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,mapIds_base)
importFrom(AnnotationDbi,orgPackageName)
importFrom(AnnotationDbi,select)
importFrom(AnnotationDbi,testForValidKeytype)
importFrom(AnnotationDbi,testSelectArgs)
importFrom(AnnotationFilter,AnnotationFilter)
importFrom(AnnotationFilter,AnnotationFilterList)
importFrom(AnnotationFilter,GRangesFilter)
importFrom(AnnotationFilter,condition)
importFrom(AnnotationFilter,convertFilter)
importFrom(AnnotationFilter,distributeNegation)
importFrom(AnnotationFilter,field)
importFrom(AnnotationFilter,logicOp)
importFrom(AnnotationFilter,supportedFilters)
importFrom(AnnotationFilter,value)
importFrom(BiocFileCache,BiocFileCache)
importFrom(BiocFileCache,bfccache)
importFrom(BiocFileCache,bfcnew)
importFrom(BiocFileCache,bfcquery)
importFrom(BiocFileCache,bfcremove)
importFrom(BiocFileCache,bfcrpath)
importFrom(DBI,dbListTables)
importFrom(DBI,dbRemoveTable)
importFrom(DBI,dbWriteTable)
importFrom(GenomeInfoDb,"seqinfo<-")
importFrom(GenomeInfoDb,"seqlevels<-")
importFrom(GenomeInfoDb,Seqinfo)
importFrom(GenomeInfoDb,as.data.frame)
importFrom(GenomeInfoDb,genomeBuilds)
importFrom(GenomeInfoDb,seqinfo)
importFrom(GenomeInfoDb,seqlevels)
importFrom(GenomicFeatures,cds)
importFrom(GenomicFeatures,cdsBy)
importFrom(GenomicFeatures,exons)
importFrom(GenomicFeatures,exonsBy)
importFrom(GenomicFeatures,fiveUTRsByTranscript)
importFrom(GenomicFeatures,genes)
importFrom(GenomicFeatures,intronsByTranscript)
importFrom(GenomicFeatures,promoters)
importFrom(GenomicFeatures,threeUTRsByTranscript)
importFrom(GenomicFeatures,transcripts)
importFrom(GenomicFeatures,transcriptsBy)
importFrom(GenomicRanges,"mcols<-")
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,mcols)
importFrom(GenomicRanges,split)
importFrom(IRanges,elementNROWS)
importFrom(IRanges,psetdiff)
importFrom(IRanges,subsetByOverlaps)
importFrom(RSQLite,SQLite)
importFrom(RSQLite,dbConnect)
importFrom(RSQLite,dbDisconnect)
importFrom(RSQLite,dbExecute)
importFrom(RSQLite,dbGetQuery)
importFrom(RSQLite,dbListTables)
importFrom(RSQLite,dbWriteTable)
importFrom(S4Vectors,isSingleNumber)
importFrom(S4Vectors,mcols)
importFrom(S4Vectors,metadata)
importFrom(dbplyr,build_sql)
importFrom(dbplyr,sql_render)
importFrom(dbplyr,src_dbi)
importFrom(dbplyr,src_sql)
importFrom(dbplyr,tbl_sql)
importFrom(dplyr,"%>%")
importFrom(dplyr,all_vars)
importFrom(dplyr,arrange)
importFrom(dplyr,arrange_)
importFrom(dplyr,as.tbl)
importFrom(dplyr,as_tibble)
importFrom(dplyr,collect)
importFrom(dplyr,compute)
importFrom(dplyr,desc)
importFrom(dplyr,distinct)
importFrom(dplyr,distinct_)
importFrom(dplyr,filter)
importFrom(dplyr,filter_)
importFrom(dplyr,filter_at)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,group_by_)
importFrom(dplyr,inner_join)
importFrom(dplyr,is.tbl)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_)
importFrom(dplyr,order_by)
importFrom(dplyr,pull)
importFrom(dplyr,rename)
importFrom(dplyr,rename_)
importFrom(dplyr,right_join)
importFrom(dplyr,select_)
importFrom(dplyr,show_query)
importFrom(dplyr,src)
importFrom(dplyr,src_tbls)
importFrom(dplyr,summarise)
importFrom(dplyr,summarise_)
importFrom(dplyr,summarize)
importFrom(dplyr,summarize_)
importFrom(dplyr,tbl)
importFrom(dplyr,union)
importFrom(dplyr,union_all)
importFrom(dplyr,vars)
importFrom(methods,as)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,setClass)
importFrom(methods,setMethod)
importFrom(methods,setValidity)
importFrom(methods,show)
importFrom(methods,slot)
importFrom(tibble,as_tibble)
importFrom(tools,file_ext)
importFrom(utils,capture.output)
importFrom(utils,installed.packages)
importFrom(utils,read.csv)
importFrom(utils,tail)
