| optimizeReads {ORFik} | R Documentation |
Keep only the ones that overlap within the grl ranges. Also sort them in the end
optimizeReads(grl, reads)
grl |
a |
reads |
a GRanges or GAlignment object |
the reads as GRanges or GAlignment
Other utils:
bedToGR(),
convertToOneBasedRanges(),
export.bed12(),
fimport(),
findFa(),
fread.bed(),
readBam(),
readWig()