findFromPath {ORFik}R Documentation

Find all candidate library types filenames

Description

From the given experiment

Usage

findFromPath(
  filepaths,
  candidates = c("RNA", "rna-seq", "Rna-seq", "RNA-seq", "RFP", "RPF", "ribo-seq",
    "Ribo-seq", "mrna", "mrna-seq", "mRNA-seq", "CAGE", "cage", "LSU", "SSU", "ATAC",
    "tRNA", "SHAPE", "PRPF")
)

Arguments

filepaths

path to all files

candidates

Possible names to search for.

Value

a candidate library types (character vector)

[Package ORFik version 1.7.21 Index]