bedToGR {ORFik}R Documentation

Converts different type of files to Granges

Description

column 5 will be set to score Only Accepts bed files for now, standard format from Fantom5

Usage

bedToGR(x, bed6 = TRUE)

Arguments

x

A data.frame from imported bed-file, to convert to GRanges

bed6

If bed6, no meta column is added

Value

a GRanges object from bed

See Also

Other utils: convertToOneBasedRanges(), export.bed12(), fimport(), findFa(), fread.bed(), optimizeReads(), readBam(), readWig()

[Package ORFik version 1.7.21 Index]