2b15a8d5a3c9cb3bc8eafea452fe3418 *DESCRIPTION
36e9cdb7b00a09aff787028035da87e8 *INDEX
aab1a1a690350b2cafe0aa22ee226218 *LICENSE
051e1c4f7017297c45703313288cc743 *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
d654541d149d69c6c2be362a69729d43 *Meta/hsearch.rds
f4720c2d499c271d2666e9116daa3e7b *Meta/links.rds
6166355e844e2064e0d00952e23dd021 *Meta/nsInfo.rds
338f24d8ece795e0c10574846bed580c *Meta/package.rds
420ab0275b00da141695257ca1cd25c9 *Meta/vignette.rds
168ebfab71a76fab29dffd78ae64b4b7 *NAMESPACE
e5b46e94fec5fe30da73f727cf97644e *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/GeneStructureTools
d74d1e4bbf3766ea2b3e01c36d6b7973 *R/GeneStructureTools.rdb
a9f756765328f75cd23e0cc7243fe5d2 *R/GeneStructureTools.rdx
3f8345ef685bc5402955a0f0bacd6f97 *doc/Vignette.R
a986096c2549236e38c331c1eb88d14f *doc/Vignette.Rmd
dc404f482e6472446bc3560c53a6da3a *doc/Vignette.html
542839b3e9e3893d67c2321bebd1b96d *doc/index.html
a9ba88162c20eddfc11c351d92fdcd09 *extdata/dexseq_process.R
96640b2e1735a4a23445a79154a89427 *extdata/dexseq_results_significant.txt
21a6c46d6193261e7bbcf4c7e1849f61 *extdata/example_gtf.gtf
c500de5992f92ebc83581899338c6d87 *extdata/gencode.vM14.dexseq.gtf
b28e8fedfee20f988113945166d52e0d *extdata/leafcutter/per_intron_results.tab
962287f8f3daaaae762c5f2eb8ab6267 *extdata/leafviz2table.R
d340f2509b1c4e1ccc74ed9e3b7799a0 *extdata/whippet/01_v_21.diff.gz
a751ff8f2e7f44be9fafbcedf6380afc *extdata/whippet/A01.jnc.gz
14fc894210fd1272e528613d72c5827b *extdata/whippet/A01.psi.gz
4bb796ee52ba3c7bff0733fd152de391 *extdata/whippet/A21.jnc.gz
bab86c79e977dd697ad0fdf037e2575d *extdata/whippet/A21.psi.gz
a64605c248ed60f04f1d5dfc334f181d *extdata/whippet/B01.jnc.gz
44c88c32417f2146e5e1a394243531be *extdata/whippet/B01.psi.gz
1210ab94aae2149703812243434a9883 *extdata/whippet/B21.jnc.gz
63b0451eca429697512091dbe65874cc *extdata/whippet/B21.psi.gz
f0e50ed69a8762a0c858c1b759ec7294 *help/AnIndex
56f4182cb9729432e946bdedf926b8d8 *help/GeneStructureTools.rdb
59883d156ddd215ce0aad8096374e1c8 *help/GeneStructureTools.rdx
4253155ba1eea2ba0f70ee0ffb7b07b0 *help/aliases.rds
bf4801a27e1c7744b9d07a1dc6478be5 *help/paths.rds
f6fe8c59d4b760b3670b91951f22c4af *html/00Index.html
806b9075dfd4de9c9baa3935f202f75a *html/DEXSeqIdsToGeneIds.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
02aba4ff84037a73d2afe2170d62d0a6 *html/UTR2UTR53.html
fca3962483a7389ecb2ffeebc4c6906f *html/addBroadTypes.html
0be3d4545ca1c9aa673b7677794c9df8 *html/addIntronInTranscript.html
d471cd96b7038059dd620784900cd721 *html/addSets.html
255bdc0b62f9cca0ec5ff71a521f7907 *html/alternativeIntronUsage.html
6664b36b4af57a2bf8fcb63469b5bd45 *html/annotateGeneModel.html
d0a6b55f3bd84e54e06a556b0910dec2 *html/attrChangeAltSpliced.html
dcff9736eaf6e2033bd41508bf666d79 *html/coordinates-methods.html
5deaa3030aa59da18a9da1580bc9b9d4 *html/cumsumANDpad.html
93b4f1022fdb81e292b8252a512d5279 *html/diffSplicingResults-methods.html
c84cfe81d8218dabe69872713a676f32 *html/exonsToTranscripts.html
2b38578b3a633082d7f4f0ad83bb5966 *html/filterGtfOverlap.html
a20eb35b1c847ca40d1c95205868bf35 *html/filterWhippetEvents.html
a6c827855b93bc256a695454f8e4d01b *html/findDEXexonType.html
3c0daae60330e97325179a5ad66ac1d4 *html/findExonContainingTranscripts.html
1fce80f8c53a3bfa99ad51c95ce66923 *html/findIntronContainingTranscripts.html
02dc424db03fc16eee8f9f7cc12c49e2 *html/findJunctionPairs.html
028ebafb04d20daf2858dfbeb90ec567 *html/formatWhippetEvents.html
c0dc3c305d894a869330bc491b301b6b *html/getOrfs.html
d0bde25fa65a63611799022680978d2f *html/getUOrfs.html
cdd8ef833341e21b88b866af0c73dd91 *html/junctions-methods.html
d41db081fc9d9520f9e97eb6b78ab871 *html/leafcutterTranscriptChangeSummary.html
2ab9213dd29d88167009aec55f7b0adf *html/makeGeneModel.html
49c2ca81c7a68cb03caa1383615e8bcd *html/maxLocation.html
5b42b5afceb4175c615b6e63e715b936 *html/orfDiff.html
f10fe9e340609ceb02e3c629766818ec *html/orfSimilarity.html
d5ed73ecbf700d6e7b1e88d5c65c746f *html/overlapTypes.html
1cbdbd9b78210e9404920e4323f7cf1e *html/readCounts-methods.html
7298bc57545dbd412b9b282da13873eb *html/readWhippetDIFFfiles.html
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8b91f9b3f44239ab3121282df2a7e98f *html/readWhippetJNCfiles.html
525bdd1924e0df624f3aa105d55e1562 *html/readWhippetPSIfiles.html
0b8a4ef32d8e8f3bc973fbd1ad5646e5 *html/removeDuplicateTranscripts.html
bd13da96a3ede644c4b9ac7920581ee3 *html/removeSameExon.html
c749beaf9847985cb94ba75e1bed30d7 *html/removeVersion.html
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6ca5c8d494fb16622d687c4be3b1fde3 *html/summariseExonTypes.html
dba5ba7280eadad9a587e461a62659be *html/transcriptChangeSummary.html
00fa49e33baaeef9b88df1663f33edb0 *html/whippetDataSet-class.html
84c89acceba6f4d5f1a1e99a591b16c0 *html/whippetTranscriptChangeSummary.html
