makeVCFFromGA4GHResponse function

Description

Convert DataFrame output from searchVariants and getVariant functions to VCF class.

Usage

makeVCFFromGA4GHResponse(variants)

Arguments

Value

VCF object.

See Also

searchVariants, getVariant, VCF, DataFrame

Examples

host <- "http://1kgenomes.ga4gh.org/"
## Not run: 
datasetId <- searchDatasets(host, nrows = 1)$id
variantSetId <- searchVariantSets(host, datasetId, nrows = 1)$id
variants <- searchVariants(host, variantSetId, referenceName = "1",
    start = 15000, end = 16000)
variants

makeVCFFromGA4GHResponse(variants)

## End(Not run)