600419cdf62dfd0fa4383609e059a8c7 *DESCRIPTION
9edecc22e8a58a99e24ef228c8c0e5c1 *INDEX
8864fda5890a42cd4f8a5abd55b645bd *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
c14a95abfb494ba7f4e39039e30ad99b *Meta/hsearch.rds
97947e27c88e6baf4f536ad1ed0c9868 *Meta/links.rds
fad74f1160e305e2955bf839f1072234 *Meta/nsInfo.rds
a6ee71325bf0b821f75f7d2a589d995e *Meta/package.rds
a82f08ea64d55365d918d4bc4108b838 *Meta/vignette.rds
94aae69bff0e78031fe9d832370fbaf4 *NAMESPACE
6e87938fd077ec5c682f85cf5510b5f3 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/FindMyFriends
9a15642a2c5a821a9c3a82e28e5c44f0 *R/FindMyFriends.rdb
779c76cd7243158873dea394a293404f *R/FindMyFriends.rdx
1dbd5d17d6b5a02c218105f7118f5989 *doc/FindMyFriends_intro.R
f81e3e59a6933dd142a3816763cef4dd *doc/FindMyFriends_intro.Rmd
b91417795e0a12d6154e637a11e57064 *doc/FindMyFriends_intro.html
8d19751bcdc17fdbdbff53bcf1ee2e60 *doc/index.html
fa46e1011a04ec09310d7e0e02add746 *extdata/Mycoplasma.zip
1e5bee3f07405b335c2b85b200524867 *extdata/examplePG/example.annot
915ea4715c2f07af1daa3f0299dbb858 *extdata/examplePG/groupsNS.txt
4ab5ee4efeaade14d15df92b1eb04020 *extdata/examplePG/groupsWG.txt
6b8fa4249be53ba59699e82260b97d61 *extdata/examplePG/paraNS.txt
b9fb498e4ff448e0d2f9b3ce9a4df4f2 *extdata/examplePG/paraWG.txt
4d3d4c9cb4a952dc86ef25e5c5189ce4 *help/AnIndex
bd59a0159c8cc5f12609142234177fd2 *help/FindMyFriends.rdb
216a23944bcc42a3c910f8eea5725f34 *help/FindMyFriends.rdx
4af4724937bcb6b59f5e4a7d6264c9c0 *help/aliases.rds
2d8b477f305c99a9045ff98ab59cb494 *help/paths.rds
4cfc8d5e293bb39aadd04ffa59d98a21 *html/00Index.html
d27a0c5c2a07eca90ace35f4d383109f *html/FindMyFriends-package.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
bf4e12c9d25ebb9b39078efb152b588f *html/addGenomes.html
304bebc52825bd7cac199388e775ded3 *html/addGroupInfo.html
b1a2029cea73320d955de3d8168c5fd4 *html/addOrgInfo.html
0010bfc4202367ddca3e2c29702f47a2 *html/cdhitGrouping.html
b4454a9eb4c8b28af0b21b09e35cff3d *html/collapseParalogues.html
56c57f95193b8e3adcd22da5e20e2fbf *html/defaults.html
af1dd080c145c41e2eaa946d55293753 *html/fillDefaults.html
afa1a6fd52ac63bbeea693f68f7f9311 *html/geneLocation.html
9c1319e4dd2a3f38fe400f252de8969e *html/geneNames.html
c6cec806c863d29d12bb0e73928ee444 *html/geneWidth.html
0dfdaf184f404b212200da343530c80f *html/genes.html
3fa6a6164a26477ac6a01e0e40afac7f *html/getNeighborhood.html
8d14def402ef3572bbe96859ee446083 *html/getRep.html
c78e4ee0868ea10391e92eae278ab3dd *html/gpcGrouping.html
ae92e0096e21d16c808b2230171fbcaf *html/graphGrouping.html
f563e0f7eff84c47423902fb2dba144d *html/groupInfo.html
8cdb41d9d1b0a8ec83b4147578648fd3 *html/groupNames.html
19a97d5343313fc9e2a5b7d2db17e91e *html/groupStat.html
9dc394a1922c6b4a62422ad2b1040999 *html/hasGeneGroups.html
eaf5c40257707562bd9e57922e0f403c *html/hasGeneInfo.html
a2d47d6c602c14dd53c642cb9a25558b *html/hasParalogueLinks.html
95e6e6f9417e44e15b9e8b7b98e430e3 *html/internalGroupGenes.html
ed61a937a6f6183d1635136592e83d43 *html/internalMergePangenomes.html
48f757dfaecba8e1926fcd879375c7ea *html/internalMetadata.html
184ebe91c94716c85f797e83ca264300 *html/kmerLink.html
2c457bb25462eb60d036b03d35cd3cea *html/kmerSimilarity.html
97ab52b567abdda7000ffd8818a747e7 *html/kmerSplit.html
3e97aba0c11fadacdf70fc17e2d700c9 *html/loadPgExample.html
26951c58821dacc71cbc617dbaae3477 *html/manualGrouping.html
059df6064ddfdcafd891e8f3310eba29 *html/nGeneGroups.html
7bf6eb611807903b9fc49ccb2f836134 *html/nGenes.html
3f74856ac1955411d60b13e0e1f70907 *html/nOrganisms.html
018cc9551794f84094f0b85030554d9d *html/neighborhoodSplit.html
e3d8d41e37fc9d72f56b979a5173467c *html/orgInfo.html
6532a1503354c646526a54815f2fa843 *html/orgNames.html
f6f01acac85914b3c01375f8643f8d54 *html/orgStat.html
1d2586b2581b6005b8a3e1692e5d2486 *html/pangenome.html
0b542308c454e0eab19940dd8008403c *html/pcGraph.html
9af05b879ca37e2231783c6d899ee4d8 *html/pgFull-class.html
dc6c3317a38b11c38db062140ceb27d9 *html/pgFullLoc-class.html
a26b4909a6a1ec335d39010ba64e7422 *html/pgInMem-class.html
3fd09439254b46e9f7ef2229f4e81d0f *html/pgInMemLoc-class.html
f1548e0acac6fd2125e78b7d5466ec79 *html/pgLM-class.html
47839470da37097e24a09af384670d21 *html/pgLMLoc-class.html
f5e8167d52bd3095e87d3bc0e1eb3906 *html/pgMatrix.html
2de5e0e5c3c690241532f2d88512bc5b *html/pgSlim-class.html
079ba5f262d4805350c80f4b101aba55 *html/pgSlimLoc-class.html
dc84e65f273b7f28a1fbe17253e7cc0f *html/pgVirtual-class.html
f62b0421198c7dc854e0fc9a30ee7bf0 *html/pgVirtualLoc-class.html
dd06872897cc709084719f06a537d835 *html/plotEvolution.html
ac2db2073b5b127965f612dac2180658 *html/plotGroup.html
ea99798a00439047d4d072be37cbde19 *html/plotNeighborhood.html
8875e2ab4fe32eb26e6c1bb5499dd23b *html/plotSimilarity.html
2b15de7cbb66cb2c2dfacb907dc05875 *html/plotStat.html
7ccbaed4d210615eb481686b873e0782 *html/plotTree.html
f631aa4067b0f304cea8e7b0c1c93d5a *html/readAnnot.html
0b096d0bf1b91ca14fddd4ec9504972a *html/removeGene.html
899d56213e1d8ecf22687f95d61857be *html/reportGroupChanges.html
2839fe2d7bd65c7d42c0943dd4a694d3 *html/seqToGeneGroup.html
2c528aff7ff6de8c290641acb24078c6 *html/seqToOrg.html
ab4821d815ecf06ce4673253461f9ddc *html/translated.html
75fb50121c63f4c824b614702ce7d200 *html/variableRegions.html
23b6094e664a8b9fa6760549d9c5ae90 *libs/i386/FindMyFriends.dll
e1ebb62d0b4a3288f8a336a88403e873 *libs/x64/FindMyFriends.dll
