| plot-methods {EDASeq} | R Documentation |
plot in Package EDASeq High-level function to produce plots given one BamFileList object and one FastqFileList object.
signature(x = "BamFileList", y = "FastqFileList")It produce a barplot of the percentage of mapped reads. If strata=TRUE it stratifies the bars according to the unique/non-unique mapped reads.
To be meaningful, x should be a set of aligned reads and y a set of raw reads on the same samples.