| DTA-package {DTA} | R Documentation |
The DTA package implements all methods of the quantitative kinetic modeling approach belonging to DTA (Dynamic Transcriptome Analysis) to estimate mRNA synthesis and decay rates from individual time point measurements.
| Package: | DTA |
| Type: | Package |
| Version: | 2.0.1 |
| Date: | 2012-03-22 |
| License: | Artistic-2.0 |
| LazyLoad: | yes |
Bjoern Schwalb <schwalb@lmb.uni-muenchen.de>
C. Miller, B. Schwalb, K. Maier, D. Schulz, S. Duemcke, B. Zacher, A. Mayer, J. Sydow, L. Marcinowski, L. Doelken, D. E. Martin, A. Tresch, and P. Cramer. Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast. Mol Syst Biol, 7:458, 2011. M. Sun, B. Schwalb, D. Schulz, N. Pirkl, L. Lariviere, K. Maier, A. Tresch, P. Cramer. Mutual feedback between mRNA synthesis and degradation buffers transcript levels in a eukaryote. Under review. B. Schwalb, B. Zacher, S. Duemcke, D. Martin, P. Cramer, A. Tresch. Measurement of genome-wide RNA synthesis and decay rates with Dynamic Transcriptome Analysis (DTA/cDTA). Bioinformatics.
## see vignette or supplemental material of the given references.