| plotXICgroup {DIAlignR} | R Documentation |
Plot Extracted-ion chromatogram group.
plotXICgroup(XIC_group, peakAnnot = NULL, Title = NULL)
XIC_group |
(list) It is a list of dataframe which has two columns. First column is for time and second column indicates intensity. |
peakAnnot |
(numeric) Peak-apex time. |
Title |
(logical) TRUE: name of the list will be displayed as title. |
A plot to the current device.
Shubham Gupta, shubh.gupta@mail.utoronto.ca
ORCID: 0000-0003-3500-8152
License: (c) Author (2019) + GPL-3 Date: 2019-12-13
dataPath <- system.file("extdata", package = "DIAlignR")
runs <- c("hroest_K120809_Strep0%PlasmaBiolRepl2_R04_SW_filt",
"hroest_K120809_Strep10%PlasmaBiolRepl2_R04_SW_filt")
XICs <- getXICs(analytes = "QFNNTDIVLLEDFQK_3", runs = runs, dataPath = dataPath,
XICfilter = "none")
plotXICgroup(XICs[["hroest_K120809_Strep0%PlasmaBiolRepl2_R04_SW_filt"]][[1]])
XICs <- getXICs(analytes = "14299_QFNNTDIVLLEDFQK/3", runs = runs, dataPath = dataPath,
XICfilter = "sgolay", SgolayFiltOrd = 4, SgolayFiltLen = 13, analyteInGroupLabel = TRUE)
plotXICgroup(XICs[["hroest_K120809_Strep10%PlasmaBiolRepl2_R04_SW_filt"]][[1]])