getMZMLpointers {DIAlignR}R Documentation

Get pointers to each mzML file.

Description

Returns instantiated mzRpwiz object associated to mzML file.

Usage

getMZMLpointers(dataPath, runs)

Arguments

dataPath

(char) path to mzml and osw directory.

runs

(A vector of string) names of mzml file without extension. Vector must have names as shown in the example.

Value

(A list of mzRpwiz)

Author(s)

Shubham Gupta, shubh.gupta@mail.utoronto.ca

ORCID: 0000-0003-3500-8152

License: (c) Author (2019) + GPL-3 Date: 2019-12-13

Examples

dataPath <- system.file("extdata", package = "DIAlignR")
runs <- c("run0" = "hroest_K120808_Strep10%PlasmaBiolRepl1_R03_SW_filt",
 "run1" = "hroest_K120809_Strep0%PlasmaBiolRepl2_R04_SW_filt")
mzPntrs <- getMZMLpointers(dataPath = dataPath, runs = runs)
[Package DIAlignR version 0.99.12 Index]