getAnalytesName {DIAlignR}R Documentation

Get names of analytes found in all runs

Description

This function provides all found analytes or only common analytes that have m-score less than analyteFDR.

Usage

getAnalytesName(oswFiles, analyteFDR = 1, commonAnalytes = TRUE)

Arguments

oswFiles

(list of data-frames) it is output from getOswFiles function.

analyteFDR

(numeric) only analytes that have m-score less than this, will be included in the output.

commonAnalytes

(logical) TRUE: intersect across all runs, FASLE: union across all runs.

Value

A vector of strings.

Author(s)

Shubham Gupta, shubh.gupta@mail.utoronto.ca

ORCID: 0000-0003-3500-8152

License: (c) Author (2019) + GPL-3 Date: 2019-12-14

See Also

getOswFiles

Examples

data("oswFiles_DIAlignR", package = "DIAlignR")
## Not run: 
getAnalytesName(oswFiles = oswFiles_DIAlignR, analyteFDR = 0.01, commonAnalytes = TRUE)

## End(Not run)

[Package DIAlignR version 0.99.12 Index]