56c72be05c2afea80924e625c6d0ee00 *DESCRIPTION
b0630d098b8138b9d08991ebaaa4d2d1 *INDEX
9fe167fb8a41ffe74702239c9177f9d0 *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
e5348234938164898435befba68993a6 *Meta/hsearch.rds
6c0181fe79b99b4374fbe9e8ca6c503a *Meta/links.rds
f74bb751c26af93e593cc0bf0f05edcc *Meta/nsInfo.rds
ebf911f2092cf3e33344b354fb88c733 *Meta/package.rds
54986bd0ea07852b9e25cb7c9380d6d0 *Meta/vignette.rds
624c32522c925f99e104627539b048a9 *NAMESPACE
97c283ff2e14441561f427bbebdace76 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/DEScan2
5c1a939aef2df25aad5d2891b404cf47 *R/DEScan2.rdb
a1693cc56435c64e08059c8fb100bd73 *R/DEScan2.rdx
3955581c08e2c8da62a0c15d3e48ab29 *doc/DEScan2.R
6c504cad4ab744de4f306a4d25aead2f *doc/DEScan2.Rmd
3d411c42df9a3333421426a83dac3f4b *doc/DEScan2.html
bcb978d34acdbb78cfb4eafb6eb72185 *doc/index.html
00b5bbd76de1cbfd6c735ab8d3f853fb *extdata/bam/or_FC1.bam
9b42792f827c0364f4345c168efe27b0 *extdata/bam/or_FC1.bam.bai
7bae660804d801aa1ace5d80c89a9a48 *extdata/bam/or_FC4.bam
1af6e70338ffd9ca7defc8487b3cf27b *extdata/bam/or_FC4.bam.bai
84cf7ddf664f87c1ca7caf9fc33e4073 *extdata/bam/or_FC6.bam
17f6f5c7357f00a56efaf17d85f857ce *extdata/bam/or_FC6.bam.bai
e8bf4b754d4eb884255ff45478aac0a8 *extdata/bam/or_FC9.bam
2c737e8f81cde48329c1093c40039be9 *extdata/bam/or_FC9.bam.bai
a870c98a7c7c1b308f6e0b1b9ed3484a *extdata/bam/or_HC1.bam
ddb60cca9206fb1072368c6b069c650e *extdata/bam/or_HC1.bam.bai
61335ebeba5ef06ce32d97059cee7ef6 *extdata/bam/or_HC4.bam
c9c7e56c433a7620b434d5a4d26807eb *extdata/bam/or_HC4.bam.bai
470b31b55e0f345afe2d98fa087314bb *extdata/bam/or_HC6.bam
b92aac06c57d5bffa31f67ff4dfb7d2d *extdata/bam/or_HC6.bam.bai
b9c224c3fad42d9efffff30b5c492858 *extdata/bam/or_HC9.bam
90893c9c9ef82daaed37318da3f54819 *extdata/bam/or_HC9.bam.bai
5e895ad9eb7e2dc33edba990b142e2d1 *extdata/bed/FC1.bam.bed.zip
2310878d5743e7da726c831fcfd10b16 *extdata/peaks/RData/peaksGRL_all_files.rds
40c2714be95717a97ad4b05a79907f0a *extdata/peaks/bed/H_FC1.bed.zip
16df2c83266756fa6cb3b9a53a8105d1 *extdata/peaks/bed/H_FC4.bed.zip
5be964a6bea3332c1939e7c246945c3e *extdata/peaks/bed/H_FC6.bed.zip
672e18bb612e9d6e7ff3e91644243a2f *extdata/peaks/bed/H_FC9.bed.zip
d10517c5b2771fe154d4000e4c89a0e7 *extdata/peaks/bed/H_HC4.bed.zip
6eb216bd7ba16854822f2035eea28945 *extdata/peaks/bed/H_HC6.bed.zip
aeb2f544b2902195a02dedc4ea255cce *extdata/peaks/bed/H_HC9.bed.zip
f7d8e30b145c0d24c50ddf0db3c90b25 *extdata/regions/regions.rds
28c9992dc3cbe3e9581b72bffa74aa21 *extdata/tests/counts/finalRegionsSE.rds
1f17b3f338ae2d769cd65a858df2582a *extdata/tests/inputdata/FCGRL.rds
d092008ae0f2e15a24f8db2bba911516 *extdata/tests/inputdata/bam/FC1.bam
66f547eb1b6d55a75347415d4ce21d3a *extdata/tests/inputdata/bam/FC1.bam.bai
5e895ad9eb7e2dc33edba990b142e2d1 *extdata/tests/inputdata/bed/FC1.bam.bed.zip
e1a9ecfe303fe6a3cfd3029efdfc8617 *extdata/tests/peaks/FC1_GRL.rds
57e86d61c9f4b5feba9ed809672a50fd *extdata/tests/peaks/peaks_all_samples.rds
b0b1f3396b83cccb759275951beb6ec2 *extdata/tests/z/z_matrix.rds
8dba014e0ff255dc2ac06194f9dc0be1 *help/AnIndex
b2bb9b5348a1686811d794a7252f57fb *help/DEScan2.rdb
aff771c5dfe72891085e504d42168406 *help/DEScan2.rdx
0da357a8ef67d9c623eb26f5bd316ba4 *help/aliases.rds
0e4cb0983160327bb746db20449d9ecf *help/paths.rds
e64ef30d426b2c1ed940d31e875a3b4a *html/00Index.html
ebcdcb1ebc91c188c46df393cae69436 *html/DEScan2.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
5fd625659ef414abdea2581955dae75c *html/RleListToRleMatrix.html
e362199165d939137719cd1cbce64ed9 *html/binToChrCoordMatRowNames.html
2f04a6c2d61d64d37586d66881f72e0c *html/binnedCovOnly.html
f36118bf29a5b6434d82cf4e37d2bd91 *html/binnedCoverage.html
e19affcbbf3bc61aa6cb7b8940254707 *html/c_get_disjoint_max_win.html
f4b9dccf7a8af9e7436b2267b866240d *html/computeCoverageMovingWindowOnChr.html
27763b2aea3787f812536183577228ba *html/computeLambdaOnChr.html
c4c0f14fd77e67d28a1bd32c55711f70 *html/computeZ.html
92756c4b0696d2758240072791a2bd72 *html/constructBedRanges.html
34ab3f54a981f4ed7aa1300b8176bc93 *html/countFinalRegions.html
a0f148c437d69b6476721947d0cb599c *html/createGranges.html
de5f8be22e73b0d4c3549f0472731469 *html/cutGRangesPerChromosome.html
51aa247fe09aa00be6114189728afb80 *html/divideEachSampleByChromosomes.html
302b286415aaf72153c6f0f0a8979910 *html/evenRunMean.html
3d2dd8c906426aed339526eefe370cc2 *html/evenRunSum.html
08bbea6aca921633618db11c4e473c54 *html/finalRegions.html
8e84fd0d96f93f2651175b5be0054f6f *html/findOverlapsOverSamples.html
390d7c351c8a5a9ccc22ad024cd4e948 *html/findPeaks.html
a266fbe7ea5af8a155a4a409a06b3d5e *html/fromSamplesToChrsGRangesList.html
f38fdf29183a3ee38aafd5345c28f2ca *html/generateDFofSamplesPerChromosomes.html
d93fa3b4f0272906de134ceb08060297 *html/get_disjoint_max_win.html
86927a4fdfdb78a0aaae92c8e84f5d5b *html/giveUniqueNamesToPeaksOverSamples.html
7b2516db99e015f0ee3d80805b894e52 *html/initMergedPeaksNames.html
805f5f562c4db1bbe70687a09928644a *html/keepRelevantChrs.html
409c30890ffa6ea5df503c762aa06a80 *html/rcpparma_get_disjoint_max_win.html
4d6167e8e52c81e453137b42120aeb3b *html/readBamAsBed.html
ae0d9987c3a2ce79f72bd8d08fe3e330 *html/readBedFile.html
3560e3a4f85631936751e93bc9d9f99c *html/readFilesAsGRangesList.html
8783c2a267f622e126e1fddd861f0f76 *html/saveGRangesAsBed.html
893b891b9f7ede026982072ce48cb1a4 *html/saveGRangesAsTsv.html
883e1d0a72573ef70f9702ae608d0ffd *html/setGRGenomeInfo.html
3ca7ddeedf0ee2eb0efa6b1d48c69f4c *libs/i386/DEScan2.dll
4b82fefc64a7e3b8e0b5c017d5266e16 *libs/x64/DEScan2.dll
