1cc00c4cda5e6d81e7b60de12ba7f841 *CITATION
3842d245fc9ec7e7c6f8c3a3342536e6 *DESCRIPTION
40b332d4eb1688a0f94e73d97b7ec78a *INDEX
90a5a361e2ee669454212a33abfb94be *LICENCE
259921ca554e54b9f926885737581ea0 *Meta/Rd.rds
6ccb4308b6f3357a8db0b403a2cd3cff *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
e86fdef42ad3ac08e300a9a0edd8979a *Meta/hsearch.rds
ea3a38ab791a6fc2c3d59fdf2fa8b581 *Meta/links.rds
9a680c1a6a9214d088934a46357cda14 *Meta/nsInfo.rds
1e8bab10e58878e75a6d011175b3ae3d *Meta/package.rds
d7581dad05fb7630f2ec0bf5eba05487 *Meta/vignette.rds
93404f1e03f601fc2c32d242d9e800d1 *NAMESPACE
c12d36dd28e1e039b5e59c0913566882 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/DChIPRep
c5d41987c2d276b162b1ee74721a05c6 *R/DChIPRep.rdb
10abd15a13612b42e8fda1357565e91f *R/DChIPRep.rdx
586f4325fd5f9d00bdc71b4d7f6fa1f3 *REFERENCES.bib
974063a67669904b6c852dd957a38134 *data/Rdata.rdb
ddd38f71e2a2aec2572908709d77b721 *data/Rdata.rds
95a20aa44cf797748033451e92fd1737 *data/Rdata.rdx
4adbc252e9da501efa24eb046611c147 *doc/DChIPRepVignette.R
24a72c306e605cbd39036bfae1fd10d8 *doc/DChIPRepVignette.Rmd
25f0bd54a6f2efe863df0a37f7ab396b *doc/DChIPRepVignette.html
2c62f2a90a4071b2cba63fcc82ed9876 *doc/index.html
fc6b649812959489432dea8b79ad7e22 *exec/DChIPRep.py
e4cbd1b84aec42dc495e9d358efe38f9 *extdata/BY_conf_K4me3_1__ORF_count.txt
a244a49d9e54aa8b33ea9c27b449efd1 *extdata/BY_conf_K4me3_2__ORF_count.txt
134e18cf2217983319a9c803ae32b5f5 *extdata/BY_conf_K4me3_3__ORF_count.txt
636d9760c80f3c27e35cd6ff2c502258 *extdata/BY_conf_WCE_1__ORF_count.txt
f80e4077caea40ea668467cc7e59b265 *extdata/BY_conf_WCE_2__ORF_count.txt
f96ab7e83afba76b18115f904419dd09 *extdata/BY_conf_WCE_3__ORF_count.txt
e0dc223dd119ca6e67266500c7999ffb *extdata/SET2_conf_K4me3_1__ORF_count.txt
ec40d79f0c6939b792189c9dfaf624af *extdata/SET2_conf_K4me3_2__ORF_count.txt
f6e1b7e21960f9fd9a6320b005722313 *extdata/SET2_conf_K4me3_3__ORF_count.txt
8a337a7280a1db1f92bad381b2044335 *extdata/SET2_conf_WCE_1__ORF_count.txt
9e6d5210fbb010db3774d1801a610d09 *extdata/SET2_conf_WCE_2__ORF_count.txt
cc1bb67c22e74d69d2a39a24b0df884a *extdata/SET2_conf_WCE_3__ORF_count.txt
652dfe5e622f513c20f360878f7a28a7 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam
f0467a9f4563a5157f6e0443ab746d26 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam.bai
b7823fd346f023e863fd023e6b87611f *help/AnIndex
74e996b207d88945f8b048047f6bba56 *help/DChIPRep.rdb
f2dca812e917332d8daca6e81923457a *help/DChIPRep.rdx
1b6964793638fd5233bdb9ed31f419c1 *help/aliases.rds
ce80f8d48c34fd9e54679a09ffd8a73a *help/paths.rds
a3d6fe231ffe36c4ab535fc72624e12f *html/00Index.html
212908610e0dc06b32ba081cac0de298 *html/DChIPRep.html
d164bd42e5e6fed6b066602b60f6a72c *html/DChIPRepResults.html
cdf16574f0299c58c5fc971b0673001e *html/DESeq2Data.html
4585d50028f4bb51f45f2524edfbff75 *html/FDRresults.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
6fa6d36d3f571f57ad2ef1faa7a9239c *html/TSS_galonska.html
21721c99fcd0e64dc85f48f59f4fa5b7 *html/chip_galonska.html
9996990a4aafaf4a28ecf56ab98f8b9e *html/exampleChipData.html
8eb18ebef02144ab60328b7c28da7e9d *html/exampleInputData.html
e1bb8c7ffe0408a34a400b70dbaa4a71 *html/exampleSampleTable.html
18e99d6437192987e14b0d5a5dad8e9b *html/getMATfromDataFrame.html
f886ada051ece24437b5ac44927907b6 *html/importData.html
1f7ef299a9a479812512a4943de52697 *html/importDataFromMatrices.html
652bfb8b2e09f0d928cef05da1638b75 *html/importData_soGGi.html
a7fc47940434c78a9fada3aae91d0c1b *html/input_galonska.html
54f64204899840beb09ea8fa9d63f2a8 *html/plotProfiles.html
54376ad32fddfdf50bfae672ae253b4e *html/plotSignificance.html
82e44bb91c00bfada245e66ee0eb8437 *html/resultsDChIPRep.html
b3d7ac07bd934b8a506ee690934febdb *html/robust_mean.html
d992e49ec7a1f9c995e4ab57e5af6e22 *html/runTesting.html
2d59a03a94fd2a014835cef4e13c85b8 *html/sample_table_galonska.html
608afeeb6b3351856d8a5e0df955bb61 *html/show.html
d29650dda6db102687f84a1805c293e7 *html/summarizeCountsPerPosition.html
38e9ab3e3c9f8ce0963034219191ee68 *html/testData.html
