7a8f92357548f685794b373fc03cc7b1 *CITATION
bafed7eaea3fb2295004b31a40489e92 *DESCRIPTION
a5ef772e3b4f13e5b2d0fe5450139757 *DREAMmodel/LiverDataDREAMMIDAS.csv
7fe98547d5c6107fb8f93d96dd665d8f *DREAMmodel/LiverPKNDREAM.sif
d060cd468a9cbc490924e8c2e201206c *INDEX
6887601856c48aa95ecd27110dd8ae7a *Meta/Rd.rds
911cc210225d0d819e8f9e27b47e77cd *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
a7617a85bf74892b33c66dc74c2386f8 *Meta/hsearch.rds
a8bd84732af5f2ae70b892317eb06882 *Meta/links.rds
1e8440c69e63dc8b5ef8a3b9b7e6ba0f *Meta/nsInfo.rds
49b642b2d17c17da5e86777ecfdd5345 *Meta/package.rds
14219ac11337dd2ed93232f380ff5e2e *Meta/vignette.rds
0ede22878c487eafe22db6490f68410c *NAMESPACE
e6ce326933b77287fc310d58b56fdc8a *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/CellNOptR
5fb2839399f00dfee8d1e3bbd7b2a0a1 *R/CellNOptR.rdb
d8b22f2ea04e9913ef1592d797f35baf *R/CellNOptR.rdx
d6e7e2bd73f1380af73adfd390decbb9 *ToyModel/ToyDataMMB.csv
1ca78d17dae87816e1d8eac9455f182e *ToyModel/ToyModelMMB2.sif
fb6b7fc0528633ddb5f1f9d56deb49a0 *ToyModel/ToyPKNMMB.sif
ff9ab2aeb0659a70e1f92185e337055e *ToyModelT3/ToyDataT3.csv
d6bd3e368322dacec8f9a4ff044d8cb0 *ToyModelT3/ToyModelT3.sif
88146a03084c295a87a7447dfd43ca0b *data/CNOlistDREAM.RData
ee79d293ac9f2ee22b9bbffe6f5c7f96 *data/CNOlistToy.RData
0e858bae27cc5f60e97e9a883749b1ae *data/CNOlistToy2.RData
72547f5ca1fc648f43e31ecb41545d63 *data/CNOlistToyMMB.RData
035f1dce48785c25e98e1b1dd23c1aeb *data/DreamModel.RData
0426b6de1a9281228ed34284aa183231 *data/ToyModel.RData
d623b3af66f90e0dada5b21ecce59047 *data/ToyModel2.RData
7f5ef316b6734717a653e99f1f8fd0fb *doc/CellNOptR-examples.R
a4e367eb82fa4f6ae418cd17910faf06 *doc/CellNOptR-vignette.R
2118ba0277f47880f3d307720688348f *doc/CellNOptR-vignette.Rnw
f31a01c7e0c009eed1b0dd01ea02ecfa *doc/CellNOptR-vignette.pdf
654be87a01bfd9ead39d44869e742dbd *doc/CellNOptR0_1flowchart.pdf
29ae5dc5fbef97b6c180dc091fdce385 *doc/Fig1.png
c60d181d30a39646fc11f959a70be7cf *doc/Fig2.pdf
6f34ef1e0feb72cd33aeb3f7da98152a *doc/Fig3.pdf
1865982560f670f6ce53faf0742bd1a6 *doc/Fig4.pdf
5be95e24a8eabe466760162af0ced4ed *doc/Fig5.png
3b62c0783f64c0d704a7451b36466564 *doc/Fig6.pdf
a707dee316de75236c4f12cc9afcdd61 *doc/Fig7.pdf
f9f72862e100f72ee0e3e77167bca1e4 *doc/Fig8.pdf
8b5413cfeedb695db93f4db44d46c03a *doc/index.html
35477553786011607e15f07f391ac686 *help/AnIndex
a46e33f6ee1134814b1f5149b21526d0 *help/CellNOptR.rdb
4c7808ccc491883054991e9b54030a15 *help/CellNOptR.rdx
bc3bbb8bd276c5ef5385f9b82f262914 *help/aliases.rds
82f2316bf898bb1f3505e5f387b1db0e *help/paths.rds
3c2d497a4c5bc3ed818157ee3a60b27d *html/00Index.html
96940c765508751b4f4a2617d2e27d56 *html/CNORbool.html
98f92f3fb46d6b95cf95a123fee8bb2b *html/CNORwrap.html
63c8e18abe48395e7df53d748e090e1d *html/CNOdata.html
2dd90a19bdcdf01698533db81bf48aa6 *html/CNOlist-class.html
e8d5853f9302bf40d450ea2786e78d06 *html/CNOlist-methods.html
e702248b0c85a312d689c1bc2672b24c *html/CNOlistDREAM.html
ae0c0487ea585c063b918221aaf5ae09 *html/CNOlistToy.html
75d4ccacd7dbb905d885967ba999d03c *html/CNOlistToy2.html
4c6df7fe3bf4da369914486b3cd3c5c2 *html/CNOlistToyMMB.html
d6fffd62faf4feab098dc88bad1ec9f6 *html/CellNOptR-package.html
5c0be333030b94607355f82ac2d7b73f *html/DreamModel.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
1c42e70acc796656afe644c6e62a6d5a *html/ToyModel.html
27c93880250437ded331d89903633bc4 *html/ToyModel2.html
c83c458e628a564406ca4b57354caf8b *html/buildBitString.html
2c642912278cab5725caf912bd7cb23e *html/build_sif_table_from_rule.html
82671bd9d63328bb75a889568715912a *html/cSimulator.html
28019ff4a1b2982fd4c8863740c8ad2a *html/checkSignals.html
5f8327ae7ab1b2d0431c2032acb5fb99 *html/compressModel.html
c3f47f37276fd70eb268724251cc1360 *html/computeScoreT1.html
7b217e1564b10afb01c983d032aead04 *html/computeScoreTN.html
816678a3c6c7524d9e8691fa1659f797 *html/crossInhibitedData.html
4a500b6e99b15dee7d82560ae25047b0 *html/cutAndPlot.html
952f1d5b51039fdb2dd8efe292bb0f8e *html/cutAndPlotResultsT1.html
26f3c6f18e28b466387b2ea1748f52f4 *html/cutAndPlotResultsTN.html
cacd4e8249ddc06366684d867a758329 *html/cutCNOlist.html
ba5b657693d3b840111aacff790f0caf *html/cutModel.html
0d783cb047bbe36c684dc71111a1f4a4 *html/cutNONC.html
2b1ea0b2bfa9b323437b6ef692fbad71 *html/cutSimList.html
ad51d9c97341bda8547a7578c744221d *html/defaultParameters.html
54ee57ac4b9550576fb7a95212698af6 *html/exhaustive.html
09c5ff74d57a36e484dd550ffef37f61 *html/expandGates.html
ea20e9ad1395bf2745c78c2cd386ad83 *html/findNONC.html
9ad6881b4d0157d14685906bea2c2127 *html/gaBinaryT1.html
ff9fc5c6de7695bb1139957972c80924 *html/gaBinaryT2.html
02a3298a1b6442b38d03a9a46c75579c *html/gaBinaryTN.html
2528e50105176cdcf18860e869e42bad *html/getFit.html
da2d978e8acc06804fed827269fcf665 *html/graph2sif.html
97fddd8838637c215a032686e92d0955 *html/indexFinder.html
6285df6b97e1aca3d2ecfa5d0acda1f0 *html/internals.html
c3ad82ed10fb4ee197f8e579d96381d8 *html/makeCNOlist.html
67c3aeb63e4a9c104b9846a2ada99279 *html/mapBack.html
0cca6edc8a3b884dfeeffc577a1d16c2 *html/model2igraph.html
ff35888fbaffacbea9aef25b7805c40e *html/model2sif.html
6fab1a65c0fa0c10e60747eb9e0d4905 *html/normaliseCNOlist.html
707a22fef42223ace07a41c06c02ab08 *html/plot-methods.html
57b0ba5fe8f1ebe79fc5932ec7ef62d7 *html/plotCNOlist.html
a8b809f2a497329fdb4c6dbcb197daf6 *html/plotCNOlist2.html
06b6a9791ed52f54bd594007c357b115 *html/plotCNOlistLarge.html
74e8830330e3433b5b94da2c7e1a9bf5 *html/plotCNOlistLargePDF.html
9c2fae0282dda24827b9084279e76eb1 *html/plotCNOlistPDF.html
17fb1f5a593c2e51a7116e8a70861aa9 *html/plotFit.html
8ac360018617da5fe3b1e787aafde44b *html/plotModel.html
c0836c59b98e1f994f54ed016818efa7 *html/plotOptimResults.html
deafd48252a966226c1a9298d8452205 *html/plotOptimResultsPDF.html
10605914201c705f726bf812fb50d60f *html/plotOptimResultsPan.html
cc263d040d23202b90e096e7a991ab87 *html/prep4sim.html
73f5eb20ba9756e1ffccef5ebbe71dba *html/preprocessing.html
7d171179f545c1d56aa259d918b61997 *html/randomizeCNOlist.html
63f0ed3033615011531680f22d212f70 *html/readBND.html
6fc2ddc67bef848e751e208085762991 *html/readBNET.html
9b53acd7974710ac35d2583f88ef0f4b *html/readMIDAS.html
037bb35e358faebeb14136033f784d64 *html/readSBMLQual.html
80dd631db7ac309139f8102c505275f5 *html/readSIF.html
7cbb31a31df8a3e697294b9fda501eb8 *html/residualError.html
493c2eb4638569062b7caa23cb358208 *html/sif2graph.html
515f2899dae857730421db88b9b583d7 *html/simulateT1.html
e977fd5d329de41643b6c0c7aad4da4c *html/simulateTN.html
32bacc51f2e091a2cf5b5d7e5c9392e1 *html/simulatorT0.html
39dc279ff3a60e59627c61258338f1da *html/simulatorT1.html
b704563c39cf546c19af40fd8c3b3d1b *html/simulatorT2.html
e1bee3b70b50e17a1ad8e311b08a673d *html/simulatorTN.html
f48b7141f976304cb74cc19702e76f06 *html/toSBML.html
98f3e53aa3cd2d9d3ad150f489c0bf08 *html/writeDot.html
17f6997d3c821dd49b5d5c012e610359 *html/writeMIDAS.html
181730d6b4827b355fd9e2dc5dab7126 *html/writeNetwork.html
39ceb2198332b35abf62700e2d5b4089 *html/writeReport.html
aaca70cd50bf81ca46a0db0b61e40876 *html/writeSIF.html
d963a662a21ee5c7f5b568ecd54db6ff *html/writeScaffold.html
e859633d140ca4d37dadf497d7001f82 *libs/i386/CellNOptR.dll
4c5c4a86b44eb0e30e7116d189163cd8 *libs/x64/CellNOptR.dll
8706931af67c6959381bf96b7b75c017 *templates/CNOR.css
b1f9e0c4c3d71777139903bafdbbafec *templates/Rlogo.png
39ce3fe5657454ce228c21690640de07 *templates/bordercorner.jpg
d825ab722bc1cb5b366a49c06cc9bfd1 *templates/bordercorner2.jpg
ea48ed430bd9af8025c74612c9b4d477 *templates/logo_saezrodriguez_mid.gif
b92d74ce744aeb6f72c7996692dee627 *templates/phinou.jpeg
