R: Plots to visualize the enrichment analysis results

enrichPlot {CeTF}

R Documentation

Plots to visualize the enrichment analysis results

Description

Generate three types of plots to visualize the enrichment analysis results from getEnrich function. The plots are an circular barplot, barplot and dotplot.

Usage

enrichPlot(res, showCategory = 10, type = "circle")

Arguments

`res`	A dataframe with `getEnrich` results.
`showCategory`	Number of enriched terms to display (default: 10).
`type`	Type of plot: circle, bar or dot (default: circle).

Value

Returns a circle, bar or dot plot of enrichment analysis results.

Examples

# loading enrichdemo
data(enrichdemo)

# circle barplot
enrichPlot(res = enrichdemo$results, 
           showCategory = 10, 
           type = 'circle')

# barplot
enrichPlot(res = enrichdemo$results, 
           showCategory = 10, 
           type = 'bar')

# dotplot
enrichPlot(res = enrichdemo$results, 
           showCategory = 10, 
           type = 'dot')

[Package CeTF version 0.99.19 Index]