6860b8d3a9a15e8882bd37d9ecf96e84 *CITATION
968e099025d422c1c60db5fa964588b2 *DESCRIPTION
6d9a97b0a78362a7ca8105e9c87c36d8 *INDEX
9b87d62c6ece5f3d18e503da55d2fabd *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
6a37c7fb559a4639e51c9436f8839ba7 *Meta/hsearch.rds
aa20b5e56c683988a92076aaabd41b78 *Meta/links.rds
740555277ccc953fe10ed108fd5cc5bf *Meta/nsInfo.rds
2f7219b659c7dd0f0620e41b01c6a2a3 *Meta/package.rds
285fd2ec75c232a4b9dc83b1af1178b3 *Meta/vignette.rds
e73ebcfcb0c28040e4178b69f9ebedf6 *NAMESPACE
b7bca2119044e100b779753a53f8545a *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CNVRanger
d076234ac298ad098aae463dc919d357 *R/CNVRanger.rdb
7894075fbd7bebeeb551ac51c4685791 *R/CNVRanger.rdx
067588337c3e169626e72d4406d8229f *doc/CNVRanger.R
6e65fae5ea1956f24d606a694e186ccf *doc/CNVRanger.Rmd
10ff9ef9680ee3e42fac75dede076baa *doc/CNVRanger.html
62d8a52b9a30efa127c214852ac82ec2 *doc/index.html
c5343759f0a014da9875d14a7fd5e5ea *extdata/CNVOut.txt
6a58cc97f0bb5d688240766564d61505 *extdata/CNVOut_noMap.txt
9fe14aa70e860411803e7e5fb8b4ea7a *extdata/GBM_GISTIC_peaks.rda
9c8027d08167db5252c991b1dcb96036 *extdata/GT1068.cnv.txt.adjusted
b191da6c9489316c6d41eca48e2e9b54 *extdata/GT112.cnv.txt.adjusted
ee407d24bd87142ff186a15045548d30 *extdata/GT1195.cnv.txt.adjusted
6d46dcf9dcac4c7d127501bdfc7de7c2 *extdata/GT1334.cnv.txt.adjusted
4dcf5ee8095c2fbf4612a3bdd9fc40f0 *extdata/GT175.cnv.txt.adjusted
c6185eafc72d3d819460c3cc76f2eaa0 *extdata/GT2391.cnv.txt.adjusted
3c6f17d1bef6e7137947130544e701c5 *extdata/GT356.cnv.txt.adjusted
d73a6e9724d76401baa764f5982d5d4c *extdata/GT546.cnv.txt.adjusted
b9057b3b49ba9b7e00cd700b5a62baf2 *extdata/GT622.cnv.txt.adjusted
c75dc60c5e0f7e78b07e27c1dfa76ac0 *extdata/GT911.cnv.txt.adjusted
a7f3a9565266e574843aa3a283f338a4 *extdata/MapPenn.txt
cb9d4d13fec59d74e29260269e67b1a9 *extdata/Parus_major_chr_sizes.txt
860143afea52eebff90414d2150a9619 *extdata/Pheno.txt
1b7378e5c916b7a805ab299fc608a8ff *extdata/Silva16_PONE_CNV_calls.csv
189ff3fdc582d0a5582245d3e9c648e9 *extdata/counts_cleaned.txt
1eebb7f4b33675b2bac6cc8e1ab0d4b6 *help/AnIndex
4a4e3d2064e66401b46429b1989e3b46 *help/CNVRanger.rdb
54919f5630fa023b504debdb19d31e99 *help/CNVRanger.rdx
be928f55fedab30e588b4695fa3f46c3 *help/aliases.rds
dd2e3b6f34f50f5b52238fe60a7ada49 *help/paths.rds
907d7db5d3d3c0a707e12c9bbec9347a *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
0cfab1fa1439df26fb421291237a8660 *html/cnvEQTL.html
8f3a18419a3f0f9fcfbffe5442562d6f *html/cnvGWAS.html
ade0315272bc0fead0c2950ae3591a1c *html/cnvOncoPrint.html
e6e9b038fbaa347513741d941f186b5c *html/generateGDS.html
1e609a9c579cedbca6019661ac69e4d4 *html/importLrrBaf.html
dfec685882bc6f412397abf80457623e *html/plotEQTL.html
457847e83cdde382ebd9c3c4d02e5152 *html/plotManhattan.html
923a7c66d417cc6989d27ef58fe8d1c9 *html/plotRecurrentRegions.html
4d002b61373d71b1f649711176c58ad1 *html/populationRanges.html
3f9058d0b1ac75740b0bfd1004491281 *html/setupCnvGWAS.html
e0b9bfc0963880df0207ebaf73aba5a8 *vignettes/CNVRanger.png
034ae3351afb42a7975e3817f38d5ea0 *vignettes/CNVsegments.png
c49d479e5c97b8ab9d441dcc3e0c3420 *vignettes/Expression.png
3afbbc51fa5423bda827fef675acdae6 *vignettes/Input.png
3c482e35f515ad3370f4e28e25b3d0f4 *vignettes/Overlap.png
f557c49e6a8636491e7994d852c31992 *vignettes/Phenotype.png
08af82bda00ef3001e376aed18fb374d *vignettes/Summarization.png
