| bam2CTSS {CAGEr} | R Documentation |
Converts from BAM to CTSS
bam2CTSS(gr, removeFirstG, correctSystematicG, genome)
gr |
A |
removeFirstG |
See getCTSS(). |
correctSystematicG |
See getCTSS(). |
genome |
See coerceInBSgenome(). |
Converts genomic ranges representing SAM/BAM alignments into a CTSS object.
Returns a CTSS object.
Other loadFileIntoGPos: import.CTSS,
import.bam.ctss, import.bam,
import.bedCTSS,
import.bedScore,
import.bedmolecule,
loadFileIntoGPos,
moleculesGR2CTSS