Retreives the SummarizedExperiment containing gene expression levels.

Description

Get or set a SummarizedExperiment using the gene expression data in the experiment slot geneExpMatrix and the sample metadata of the CAGEexp object.

Usage

GeneExpSE(object)

## S4 method for signature 'CAGEset'
GeneExpSE(object)

## S4 method for signature 'CAGEexp'
GeneExpSE(object)

Arguments

Author(s)

Charles Plessy

See Also

Other CAGEr accessor methods: CTSSclusteringMethod, CTSScoordinates, CTSScumulativesTagClusters, CTSSnormalizedTpm, CTSStagCountTable, CTSStagCount, GeneExpDESeq2, consensusClustersGR, genomeName, inputFilesType, inputFiles, librarySizes, sampleLabels, seqNameTotalsSE, tagClusters

Examples

GeneExpSE(exampleCAGEexp)