689db0db37fb2b8217254f277420e9e8 *DESCRIPTION
186d1f42bd997bac4e8450f9e13e26c8 *INDEX
858a3eb79ca44e598772c3bc638da85c *Meta/Rd.rds
1aed06d11611da23fcdab72ff1638e91 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
d2fd16f43c1274da34ebadae3ac32d58 *Meta/hsearch.rds
ca3878398b975c5efe4ec119e66769b6 *Meta/links.rds
ee8285398243c68bb5b1d47f5edb5662 *Meta/nsInfo.rds
00717c0a797cf58b66599c5c8665bc24 *Meta/package.rds
1a24591d6a55e9fcaa8fa9e8c322dda5 *Meta/vignette.rds
6e08034f74f8210c129eeecbc14b72cf *NAMESPACE
d017511814a32c5f88e06ba2ee9256da *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/transcriptR
5ea024bf4f52753c2fcc1ae3d84b5bd2 *R/transcriptR.rdb
670dd7d1cd28a3b2c6dfd3f1da2bd9ec *R/transcriptR.rdx
cdccf718c0f06aa2b18213b6d1899638 *data/annot.rda
3292676f3b034c821e78e5ba5ed955f1 *data/cds.rda
1b1ba5e803d213909fdfda9ee7ef6fd4 *data/datalist
bde948fa74c19e5c334b355904c7b1f9 *data/tds.rda
8d5c592236ce9ce14b1e1753bd84ebac *doc/index.html
e2d423e66cb6c38b73d5574927b422bd *doc/transcriptR.R
3b36062fa7b29ac2c1ef2b22223187df *doc/transcriptR.Rmd
b94a3189f040705097b14c0334b5adfd *doc/transcriptR.html
d50801198a9fc94ca2d340ba90cf9e15 *extdata/chip_reads.bam
b1bd75dd1f9641b9e89f1381a486d259 *extdata/chip_reads.bam.bai
7f2999eb7940a0c31d83d3a39444a75b *extdata/peaks.txt
b3efed05f16945956ab43ba1657823da *extdata/rna_reads.bam
1b5a7ab4d4b50c588dc2b61806e1537f *extdata/rna_reads.bam.bai
f47c69f99c9535dde5180b75f6485c58 *help/AnIndex
15578e14f8ca688db08b7bcfa5bacedf *help/aliases.rds
a62178ae650bc0fed23c4e759ffc7013 *help/paths.rds
82a7b96771a28ca808066b0bc6216de0 *help/transcriptR.rdb
da369398e57356e8d4dbeb83b8d35135 *help/transcriptR.rdx
650540dfcf3b92b8b65b8a52fca892a3 *html/00Index.html
cda4e78f35af06b857c77605e696a0e1 *html/ChipDataSet-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
810a8b7e89affaca7862f84231ec018c *html/TranscriptionDataSet-class.html
ea73818533f79aae6379f7c257197522 *html/addFeature-methods.html
a60069a6bdd7522db88b9dcbbcf1691a *html/annot.html
99a8703a3c9df740e1b2cd805a25e900 *html/annotateTranscripts-methods.html
e8b8195b2212b497f92075c380902c48 *html/breakTranscriptsByPeaks-methods.html
9d886c95d42a64f5423f34cc5af70174 *html/cds.html
759334408e622c356ac9fd1c47d3a10e *html/constructCDS.html
0acd0b6112d246d786cf85bef55feeb3 *html/constructTDS.html
94f316e3e1679b897f4b6032088b4e28 *html/detectTranscripts-methods.html
0b3a1a4708204988a7def6dab5ae0275 *html/estimateBackground-methods.html
b4532b232693bd9ebdc6480f7f911965 *html/estimateGapDistance-methods.html
5896f82d20e3ec7c536a23197853830a *html/exportCoverage-methods.html
9a1661f655c35065966ea392b403b7b1 *html/getConfusionMatrix-methods.html
7de4b962b21ac862385e1fd19a6fbab6 *html/getGenomicAnnot-methods.html
9a475770776096449bd7e17e46d9cfd6 *html/getPeaks-methods.html
2e8ced346dfeefa94c1fc56f3bd02cae *html/getPredictorSignificance-methods.html
236396b2ca0cb32b59343d0a993c66c8 *html/getProbTreshold-methods.html
8cd9d995324490324cd878d2a0133300 *html/getQuadProb-methods.html
d865f33d1c188a6214f91b4de9d38577 *html/getTestedGapDistances-methods.html
1208eb24b9b2550cdd55fbbe219f9b6f *html/getTranscripts-methods.html
956b68e6cdb9aff146b6f8b73c48418d *html/peaksToBed-methods.html
53a62742effbd6af2194b134daddcc67 *html/plotErrorRate-methods.html
3386a2e21c56c8e1cccc0a16143cadb2 *html/plotFeatures-methods.html
be5d05b9b65a73f9f644391ad87d3611 *html/plotGenomicAnnot-methods.html
9f342131eb3d3ba2989f8194e1318069 *html/plotROC-methods.html
f1e8a5c7876679b9af860df510828b17 *html/predictStrand-methods.html
ff3bac234f3bf68f0aad539d0775b0ef *html/predictTssOverlap-methods.html
55fd8ab9550be9ba33a3989955aa7875 *html/show.html
e7e441c65f80dbb8f3cd30fcbc133103 *html/tds.html
399461fd6ae2c1ecfe3667959567dc9c *html/transcriptsToBed-methods.html
