Extract cluster labels used by Slingshot

Description

Extract the cluster labels used by slingshot.

Usage

slingClusterLabels(x)

## S4 method for signature 'SlingshotDataSet'
slingClusterLabels(x)

## S4 method for signature 'SingleCellExperiment'
slingClusterLabels(x)

Arguments

Value

a vector of cluster labels or a matrix of cluster assignment weights.

Methods (by class)

• SlingshotDataSet: returns the cluster labels stored in a SlingshotDataSet object.

• SingleCellExperiment: returns the cluster labels used by slingshot in a SingleCellExperiment object.

Examples

data("slingshotExample")
rd <- slingshotExample$rd
cl <- slingshotExample$cl
sds <- getLineages(rd, cl)
slingClusterLabels(sds)