5fffb7a40392f7052d35caf144459dd0 *DESCRIPTION
542fee070718010bc2bc88fc368cbf7b *INDEX
0e6998dccf2e1a257c3a2f3188966d68 *LICENSE
7f2bbd0ab22e4f1ad61ce3d8463c759c *Meta/Rd.rds
66abedb13d38e9682d4b5125d7ef0e61 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
f3c90350144ab2a6665a6cd0ae6c64f2 *Meta/hsearch.rds
0bf389b3004ccae6157e7e70381c79ee *Meta/links.rds
308a08e171ca7d2a7382f1fb5cf6d82d *Meta/nsInfo.rds
4998d306f5688c0ef1b443790777f8dc *Meta/package.rds
ea65202ca8aad6c07b3306c175c72c23 *Meta/vignette.rds
4241f5b5171e47d5150bad01ae0c0cef *NAMESPACE
7e3fdc80a9f02aa5dcd26929bb124793 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/scruff
44a262a71c8c653784e1a65ca48ccd12 *R/scruff.rdb
bdeb69b9936290e915af78c290c8f7f9 *R/scruff.rdx
c66ae87875fdac98dad8e6ab4b0f4676 *data/bamExample.rda
fcb4e82f263128042dadf13f0fab612f *data/barcodeExample.rda
89bc6ff8fb0bef0f4510654ca33eecb0 *data/cbtop10000.rda
e51860626d7cfc5556a151308a61f77e *data/sceExample.rda
fcfc07765b48350083f125a31070c35f *data/validCb.rda
d9a760b6e23582f9932edcc084a0deaa *doc/index.html
25f8655ec6fc81bcb314059db7205de2 *doc/scruff.R
3196646b89dee8349192bdaed9f2c155 *doc/scruff.Rmd
ce27e5d4248022c2e2dc4bf8aa17190c *doc/scruff.html
c0b8b94c37ead1dd7feed0186747e53b *extdata/GRCm38_MT.fa
09e36a1c6a9f668a2487ec5c58ce1b9c *extdata/GRCm38_MT.gtf
b505b41fd5718ffd3eb71813d0d4fcae *extdata/SRR5167880_E18_20160930_Neurons_Sample_01_5000.bam
74abe8130c02e803e66c0e3b57201761 *extdata/SRR5167880_E18_20160930_Neurons_Sample_01_filtered_barcode.tsv
0fdf95c3beb5eff50934204c6109adf2 *extdata/vandenBrink_1h1_L001_R1_001.fastq.gz
983a0032d33116c75363d1d1efa54275 *extdata/vandenBrink_1h1_L001_R2_001.fastq.gz
d3aa0aa1d9520b603e8aa7f78d039b27 *help/AnIndex
a12b36855e1185ae8be60624aa28679d *help/aliases.rds
338b6d9a327004a27b448cf803d1b863 *help/paths.rds
a2b19e79be1d2d04ababb1237844ad7d *help/scruff.rdb
7aa2a3f1a2df6e1e19efb5a1f72b3fcf *help/scruff.rdx
7286a054ec4897fadff946a5c905ea79 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
787922ad9746a427488cd9c8a24f99c6 *html/alignRsubread.html
1225f206a608a6438ac4570fb458090a *html/bamExample.html
34d1ecdefa955bfc1f187e3804a2d6e2 *html/barcodeExample.html
58a3c68bbbd8e96f72f31623659b3c87 *html/cbtop10000.html
1eee555cf4a64f446b1767efef393601 *html/countUMI.html
290164b0fa55ac42727ea3fe527f76b4 *html/demultiplex.html
c0f10dffa474921cd8841c8ab68f30f1 *html/gview.html
b3d91cbbd1defa16e71e98a85bdc95c2 *html/qcplots.html
4b7f962c9715e4c32559ae77acde3a2e *html/rview.html
c7da3b2a63875df991c0a9bbee8b8d8d *html/sceExample.html
ba8b8899ef21fa0a8de876c1752eb6df *html/scruff.html
890655c0565ceff4ae06ffa67fa67bad *html/tenxBamqc.html
6964fe2f35d6bcc807b31cc867543669 *html/validCb.html
