f2197fba1e4de84ba27c7aa43c4966a3 *CITATION
f089fecbfc2db40407254a4059d8baee *DESCRIPTION
06e33caa0827cb8be3b19dde72f3b115 *INDEX
d9969bd50915ba5bda9d1a18e2d00c14 *Meta/Rd.rds
54ac0c29304ac573070d09247e7e6382 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
dc7bc980446432d35a7565aa5ec37a3e *Meta/hsearch.rds
50d4ccf432efcd330d9515f786b3876d *Meta/links.rds
c93fde63d78dbd4561217dee5de4e6af *Meta/nsInfo.rds
6c5b477463ee2a1cb48c7d0a5447380c *Meta/package.rds
ccbed1524b53fed8e492dda8f5a3b2e3 *Meta/vignette.rds
3c58e51ed31e3e39e329547d0de938fe *NAMESPACE
44ae129a9f93f36c44c550c510554cd2 *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/scPipe
3a08050881cd84b3efab8cb32c9a7ee9 *R/scPipe.rdb
c614f91c7e7181a21e99278e555d7bb4 *R/scPipe.rdx
1dc17379efee0dc44aee270095903ff5 *data/sc_sample_data.RData
2594a9728f0d35790ec31657b0f9c880 *data/sc_sample_qc.RData
d2ef606b4d80afde2dcc99daa120f8cd *doc/index.html
84352518295714a7df14e8c578552fb4 *doc/scPipe_tutorial.R
32774cd76c26cd7e96192c28b9e647af *doc/scPipe_tutorial.Rmd
d061895ea3dcaf70bafa4407419666a9 *doc/scPipe_tutorial.html
339e0225f3294bf2bf89ac33d71a73c2 *extdata/ERCC92.fa
6e4cb84dc35b55f6c26e244c3d518583 *extdata/ERCC92_anno.gff3
e6007becb38885068ee4c1569f11676c *extdata/barcode_anno.csv
8577e8f76719bf43c33a7f7db593ef83 *extdata/ens_tiny_anno.gff3.gz
95dcee5780eae0513826393d7731faf6 *extdata/ens_tiny_anno.gtf.gz
4b69e9071aaebe7e0f0b72faba999836 *extdata/ensembl_hg38_chrY.gtf.gz
2775eff980dad9481fe7170ef11b3b29 *extdata/ensembl_y_tiny.gtf.gz
1ec5e129ea424597706f4b625327c69b *extdata/gen_tiny_anno.gff3.gz
84f6ae29496eb56652f373b91bfef183 *extdata/gen_tiny_anno.gtf.gz
220922b0d0b25aa599770ca139e2d2e1 *extdata/ref_tiny_anno.gff3.gz
14fb7c015fbeae5a49a06a3447bd864c *extdata/report_template.Rmd
60ecd0d30f4bb5aee8a052a6051d2e1c *extdata/report_template_slim.Rmd
4f72dbb833c45e8d9417b4bc3a0b4716 *extdata/simu_R1.fastq.gz
6b555e64cd9a0e3dbe416284e857fae2 *extdata/simu_R2.fastq.gz
ed4dd019106f776802703cc17ca2ba4d *help/AnIndex
a312326ae8628097a8702eb872123d01 *help/aliases.rds
918bbb465e3d6d3586c1c467c1e6acd4 *help/paths.rds
84e88ab053c7af4beb396cbfae4cde32 *help/scPipe.rdb
ff8880169ff37feff0a58d768273bdde *help/scPipe.rdx
c04b12f5e2754bdd15d172a262bf9f7a *html/00Index.html
eda5179acb282eb0fc8ec03eb7d4d8ea *html/QC_metrics.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
146d21f3a0776d9d3f5f9096a14a2c1c *html/UMI_dup_info.html
3e5bc1e486b39ad22234f4fc6e069602 *html/UMI_duplication.html
2ff281dcea91476a3a33312c413b4748 *html/anno_import.html
1a9341a62c777e2407ebb25be5730e42 *html/anno_to_saf.html
8c5e150e58e2895498d9fe81deee196a *html/calculate_QC_metrics.html
a774b6b33dfd3445dc3b737508b9a4bc *html/cell_barcode_matching.html
deb68093f8bcdf22995d77753abdc1f2 *html/convert_geneid.html
dd5a796d70bb9de54a9c7a56417febfb *html/create_processed_report.html
365c15cf69aef9a870ecef16c77db953 *html/create_report.html
0a2f0d6b6af91b93b2218ba2bcc32b06 *html/create_sce_by_dir.html
4a23886b7052faabe494232cb9810a9f *html/demultiplex_info.html
6b153901ac14fd10678155de86066169 *html/detect_outlier.html
8b892c9fc4f2187be7b845e0e3e17acc *html/gene_id_type.html
360f89096a77db208884a1f093137c3e *html/get_ercc_anno.html
c7cdf2037221368885be8e6068b01e4d *html/get_genes_by_GO.html
848bcb618b10c1b74b4764af935bd131 *html/get_read_str.html
9dc42118dc2921181e34d4071cd5e954 *html/organism.html
8eb9a90dea3396e5d29e2ff4f17424d5 *html/plot_QC_pairs.html
b0b2250023e5ffab4a0b8bfcb0d4e4a9 *html/plot_UMI_dup.html
1be75c03034b41b438a8384b2d94f65c *html/plot_demultiplex.html
a3356ba7e8bf22f42d0f5f0f3abcd8c3 *html/plot_mapping.html
21638da43d6f06d4d61fdaa3bc6604d1 *html/remove_outliers.html
433cff7e98adcca94e88150c504cfb3e *html/scPipe.html
8d512c61c68079300b626b424f2b9d71 *html/sc_correct_bam_bc.html
efed874f95a44125fd47c76535673e13 *html/sc_count_aligned_bam.html
59e454ec8ff69c72b7e6c1510a45adf1 *html/sc_demultiplex.html
904a6a43fd81087f8cc633a48d87c2db *html/sc_demultiplex_and_count.html
727fce7a2fd550b750c8dc26e1f61093 *html/sc_detect_bc.html
3b75c709088e521d3f2706f25733847c *html/sc_exon_mapping.html
fd42d6c7d3920ddebbfccff641d69801 *html/sc_gene_counting.html
849ea1d0e49903518b24c2f801296039 *html/sc_sample_data.html
508f50a3f61853ff7dd71fc11d91cac2 *html/sc_sample_qc.html
4a39059824124d3c920e87a0cba6223e *html/sc_trim_barcode.html
c15dce6d4818b92b112b0ab35e35430a *libs/i386/scPipe.dll
7c369299bd518d3178226ae59fef7fea *libs/x64/scPipe.dll
e17bcd270318aaaabf8568c328e3d59c *scPipe.png
a4e7b825ee1d624e008b5bcb4659e78d *workflow.png
