Package: receptLoss
Type: Package
Title: Unsupervised Identification of Genes with Expression Loss in
        Subsets of Tumors
Version: 1.0.0
Author: Daniel Pique, John Greally, Jessica Mar
Maintainer: Daniel Pique <daniel.pique@med.einstein.yu.edu>
Description: receptLoss identifies genes whose expression is lost 
    in subsets of tumors relative to normal tissue. 
    It is particularly well-suited in cases where the 
    number of normal tissue samples is small, as the distribution
    of gene expression in normal tissue samples is approximated by a 
    Gaussian. Originally designed
    for identifying nuclear hormone receptor expression loss but 
    can be applied transcriptome wide as well.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6.0)
RoxygenNote: 7.1.0
Imports: dplyr, ggplot2, magrittr, tidyr, SummarizedExperiment
Suggests: knitr, rmarkdown, testthat (>= 2.1.0), here
VignetteBuilder: knitr
biocViews: GeneExpression, StatisticalMethod
git_url: https://git.bioconductor.org/packages/receptLoss
git_branch: RELEASE_3_11
git_last_commit: 3be5e80
git_last_commit_date: 2020-04-27
Date/Publication: 2020-04-27
NeedsCompilation: no
Packaged: 2020-04-28 07:29:09 UTC; biocbuild
Built: R 4.0.0; ; 2020-04-28 18:18:53 UTC; windows
