Hypergeometric Tests for MeSH term association

Description

Given a MeSHHyperGParams object containing a set of selected and background gene IDs, and gene-MeSH annotation data of interest, meshHyperGTest performs Hypergeomtric test for over-representation of each MeSH term accouting for the multiple testing correction.

Arguments

Details

For details on creating MeSHHyperGParams object, please read the documentation in the MeSHHyperGParams-class.

Value

A MeSHHyperGResult object.

Author(s)

Gota Morota, Koki Tsuyuzaki, Takeru Nakazato, Itoshi Nikaido

Maintainer: Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>

See Also

meshr-package, MeSHHyperGParams-class, MeSHHyperGResult-class

Examples

showMethods("meshHyperGTest")